RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GLTPD2A6NH11 291 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 STK16O75716 305 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PCDH8O95206 1070 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 SEC24AO95486 1093 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 EDN1P05305 212 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 GMPRP36959 345 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 USP46P62068 366 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 IKBKEQ14164 716 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PHKG1Q16816 387 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PAQR3Q6TCH7 311 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 CERS6Q6ZMG9 384 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 CANT1Q8WVQ1 401 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ERLEC1Q96DZ1 483 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MTERF3Q96E29 417 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 NUSAP1Q9BXS6 441 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 TFB2MQ9H5Q4 396 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 HS3ST4Q9Y661 456 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 A0A1B0GVM2 712 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 ELOVL7A1L3X0 281 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 TCAF2A6NFQ2 919 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 H6PDO95479 791 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 FAM163BP0C2L3 166 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 PROZP22891 400 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 RPS7P62081 194 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 INAQ16352 499 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 CYP2A13Q16696 494 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 SIRPB2Q5JXA9 342 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 CACUL1Q86Y37 369 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 RASAL3Q86YV0 1011 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 LEMD2Q8NC56 503 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 OR9I1Q8NGQ6 314 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 NPLOC4Q8TAT6 608 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 SYN3O14994 580 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 MTHFD1P11586 935 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 DPY19L2P1Q6NXN4 242 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 C16orf70Q9BSU1 422 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 EPB41L1Q9H4G0 881 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 NOL6Q9H6R4 1146 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 CXorf21Q9HAI6 301 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.59□□□□□ -0.55
COPA-202ENST00000368069 KCTD5Q9NXV2 234 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 FTH1P02794 183 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 FBXL22Q6P050 247 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 FUT10Q6P4F1 479 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 AHI1Q8N157 1196 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 BORCS5Q969J3 196 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 CORO1BQ9BR76 489 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 POLR3BQ9NW08 1133 aaPredicted RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 MAST2Q6P0Q8 1798 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 BEST1O76090 585 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 F2P00734 622 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 PRKCGP05129 697 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 GHRHRQ02643 423 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 SIM2Q14190 667 aaPredicted RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 TAF1AQ15573 450 aaPredicted RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 NADK2Q4G0N4 442 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 ARFGAP1Q8N6T3 406 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 ZNF614Q8N883 585 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 ZHX1-C8orf76Q96EF9 292 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 ABHD8Q96I13 439 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 MAPRE3Q9UPY8 281 aa11.59□□□□□ -0.55
COPA-202ENST00000368069 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
COPA-202ENST00000368069 SNAI1O95863 264 aaPredicted RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 DBTP11182 482 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 MTPNP58546 118 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 CDC42P60953 191 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 SERPINA9Q86WD7 417 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 OR10A6Q8NH74 314 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.56
COPA-202ENST00000368069 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 CHID1Q9BWS9 393 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 SAMD4AQ9UPU9 718 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 MYL12BO14950 172 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 RNASEH1O60930 286 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 STBD1O95210 358 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 ESR1P03372 595 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 CAPGP40121 348 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 PGBD3Q8N328 593 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 PNPT1Q8TCS8 783 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 ZNF483Q8TF39 744 aaPredicted RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 BBS4Q96RK4 519 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 NUAK2Q9H093 628 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 SMOC2Q9H3U7 446 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 TRMT13Q9NUP7 481 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 SUCOQ9UBS9 1254 aaKnown RBP11.58□□□□□ -0.56
COPA-202ENST00000368069 VPS4AQ9UN37 437 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 KCTD3Q9Y597 815 aa11.58□□□□□ -0.56
COPA-202ENST00000368069 A0A088AWK7 358 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms