RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NFKB2Q00653 900 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 TWF1Q12792 350 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 GRSF1Q12849 480 aaKnown RBP eCLIP11.47□□□□□ -0.57
USF1-201ENST00000368019 INPP5AQ14642 412 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 DCAF6Q58WW2 860 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 C6orf10Q5SRN2 563 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CERCAMQ5T4B2 595 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 FKBP9P1Q75LS8 142 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PATL1Q86TB9 770 aaKnown RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 GPR180Q86V85 440 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 DHFR2Q86XF0 187 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 MFSD6LQ8IWD5 586 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 MINDY1Q8N5J2 469 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 LZTR1Q8N653 840 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 SMYD1Q8NB12 490 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PDPRQ8NCN5 879 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PPHLN1Q8NEY8 458 aaKnown RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 LRTOMTQ8WZ04 291 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 IRF7Q92985 503 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 BORCS5Q969J3 196 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 SLCO4A1Q96BD0 722 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 MAGEB5Q9BZ81 275 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PCDHGB4Q9UN71 923 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 NDUFAF1Q9Y375 327 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PCDHGB5Q9Y5G0 923 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CACNA1BQ00975 2339 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ACACBO00763 2458 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 SPAG17Q6Q759 2223 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 KCNK1O00180 336 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 FBP2O00757 339 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 PHGDHO43175 533 aaKnown RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 AKAP10O43572 662 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 UMPSP11172 480 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GJA1P17302 382 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 PTPN1P18031 435 aaKnown RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 DCKP27707 260 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GDI1P31150 447 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 STX1BP61266 288 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GRIK2Q13002 908 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GK3PQ14409 553 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 ATP6AP1Q15904 470 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 RSPO4Q2I0M5 234 aaPredicted RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 FAM83EQ2M2I3 478 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 AGAP9Q5VTM2 703 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TMEM198Q66K66 360 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 HMBOX1Q6NT76 420 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GK5Q6ZS86 529 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 BEND5Q7L4P6 421 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 SPRED1Q7Z699 444 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TMC8Q8IU68 726 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 ELMOD1Q8N336 334 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TXNDC5Q8NBS9 432 aaKnown RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 HMGCLL1Q8TB92 370 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 SLC2A14Q8TDB8 520 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 FAM3CQ92520 227 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 FAM149B1Q96BN6 582 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 RSPRY1Q96DX4 576 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 L3HYPDHQ96EM0 354 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TBL1YQ9BQ87 522 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 GPATCH1Q9BRR8 931 aaKnown RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 IER2Q9BTL4 223 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TRIM62Q9BVG3 475 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 DPEP3Q9H4B8 488 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TREX1Q9NSU2 369 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TBC1D23Q9NUY8 699 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 NCDNQ9UBB6 729 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 PACSIN3Q9UKS6 424 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 NDRG2Q9UN36 371 aaKnown RBP11.46□□□□□ -0.57
USF1-201ENST00000368019 SH3GLB1Q9Y371 365 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 YIPF1Q9Y548 306 aa11.46□□□□□ -0.57
USF1-201ENST00000368019 MYLKQ15746 1914 aa11.46□□□□□ -0.58
USF1-201ENST00000368019 TYW5A2RUC4 315 aaKnown RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 PRORSD1PA6NEY8 169 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 STX16-NPEPL1H3BU86 382 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 PPEF2O14830 753 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 SNAP91O60641 907 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 GPC4O75487 556 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 IPO13O94829 963 aaKnown RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 MATN4O95460 622 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 AHSGP02765 367 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 LTA4HP09960 611 aaKnown RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 CHRNB1P11230 501 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CPB1P15086 417 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 JUNBP17275 347 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 IL10P22301 178 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 GABRB3P28472 473 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 GMPRP36959 345 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ARCN1P48444 511 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms