RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SMARCB1Q12824 385 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 KLHL26Q53HC5 615 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 DET1Q7L5Y6 550 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 DGLUCYQ7Z3D6 616 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 PCBD2Q9H0N5 130 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 THUMPD1Q9NXG2 353 aaKnown RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 COPS7AQ9UBW8 275 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 EGFL7Q9UHF1 273 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 SLC1A2P43004 574 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CA9Q16790 459 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 LLGL2Q6P1M3 1020 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 USP30Q70CQ3 517 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 C9orf43Q8TAL5 461 aaPredicted RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 SGK2Q9HBY8 427 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 PDE10AQ9Y233 779 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 B8ZZF3 427 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 TRUB2O95900 331 aaKnown RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 EPHA3P29320 983 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 DENND1CQ8IV53 801 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 TIGD4Q8IY51 512 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 TBATAQ96M53 351 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 ZNF823P16415 610 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CAP2P40123 477 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 AUHQ13825 339 aaKnown RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 AMIGO2Q86SJ2 522 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 METTL21AQ8WXB1 218 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 SNX15Q9NRS6 342 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CPSF6Q16630 551 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■□□□□ 11.1
TPR-201ENST00000367478 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 COPS8Q99627 209 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 OSMRQ99650 979 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 METTL8Q9H825 291 aaKnown RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 ABCB9Q9NP78 766 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 FBXO6Q9NRD1 293 aaPredicted RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 ABCD2Q9UBJ2 740 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 ABCA9Q8IUA7 1624 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 E5RJQ4 531 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 GSTT2P0CG29 244 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 NFIXQ14938 502 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 DNAJC28Q9NX36 388 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 MAP2K7O14733 419 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 GALK1P51570 392 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 MAMLD1Q13495 774 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 GLB1L3Q8NCI6 653 aaPredicted RBP12.35□□□□□ -0.43
TPR-201ENST00000367478 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CEP152O94986 1710 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 ISM1B1AKI9 464 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 PRAMEF12O95522 483 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CAV3P56539 151 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 TAMM41Q96BW9 452 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 MFSD1Q9H3U5 465 aa12.35□□□□□ -0.43
TPR-201ENST00000367478 CYP3A7-CYP3A51PA0A087WV96 503 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 M0QX08 132 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 DHX15O43143 795 aaKnown RBP12.34□□□□□ -0.43
TPR-201ENST00000367478 SCELO95171 688 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 NR2C1P13056 603 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 DRD4P21917 467 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 GLRA2P23416 452 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 CYP3A7P24462 503 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 GHDCQ8N2G8 530 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 ART4Q93070 314 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 FERD3LQ96RJ6 166 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 ALG2Q9H553 416 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 MAFFQ9ULX9 164 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 ASF1AQ9Y294 204 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 POLR3HQ9Y535 204 aaPredicted RBP12.34□□□□□ -0.43
TPR-201ENST00000367478 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 HTR7P34969 479 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 GRK6P43250 576 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 CYP4F8P98187 520 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 BTG3Q14201 252 aaPredicted RBP12.34□□□□□ -0.43
TPR-201ENST00000367478 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 DCAKDQ8WVC6 231 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 KAT2AQ92830 837 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 CREB3L1Q96BA8 519 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 ASAH2Q9NR71 780 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 FESP07332 822 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 PRKCIP41743 596 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
TPR-201ENST00000367478 LINGO2Q7L985 606 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 SPERTQ8NA61 448 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 VWA7Q9Y334 891 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
TPR-201ENST00000367478 OR2L2Q8NH16 312 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms