RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ALS2CLQ60I27 953 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TMC3Q7Z5M5 1100 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 LRRTM4Q86VH4 590 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TRIM48Q8IWZ4 208 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 CACNA2D3Q8IZS8 1091 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TFB1MQ8WVM0 346 aaKnown RBP14.65□□□□□ -0.06
CTSD-202ENST00000367196 GLYATL1Q969I3 302 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 KIAA1143Q96AT1 154 aaPredicted RBP14.65□□□□□ -0.06
CTSD-202ENST00000367196 PLEKHG4BQ96PX9 1271 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TIMM29Q9BSF4 260 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 CEP41Q9BYV8 373 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TRIT1Q9H3H1 467 aaKnown RBP14.65□□□□□ -0.06
CTSD-202ENST00000367196 TRABDQ9H4I3 376 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 GLOD4Q9HC38 313 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 KLC4Q9NSK0 619 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 SPTLC3Q9NUV7 552 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 TMEM9Q9P0T7 183 aa14.65□□□□□ -0.06
CTSD-202ENST00000367196 CHUKO15111 745 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 KMOO15229 486 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 PSTPIP1O43586 416 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 EML2O95834 649 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 VIPP01282 170 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 MAPK9P45984 424 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 DYNLT1P63172 113 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 MC2RQ01718 297 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 NFATC3Q12968 1075 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 GTF2H3Q13889 308 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 TCEAL1Q15170 157 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 LINC00303Q3SY05 128 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 PRICKLE2Q7Z3G6 844 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 KDELC2Q7Z4H8 507 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 ARHGAP22Q7Z5H3 698 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 RBM12BQ8IXT5 1001 aaKnown RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 NLGN4XQ8N0W4 816 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 NLGN4YQ8NFZ3 816 aaPredicted RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 JPH3Q8WXH2 748 aaPredicted RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 RNF25Q96BH1 459 aaPredicted RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 TADA1Q96BN2 335 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 CATSPER2Q96P56 530 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 VPS35Q96QK1 796 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 ZCCHC2Q9C0B9 1178 aaKnown RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 ADNPQ9H2P0 1102 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 FBXO8Q9NRD0 319 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 POT1Q9NUX5 634 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 OCIAD1Q9NX40 245 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.64□□□□□ -0.07
CTSD-202ENST00000367196 PCYT1BQ9Y5K3 369 aaPredicted RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 ADGRG1Q9Y653 693 aa14.64□□□□□ -0.07
CTSD-202ENST00000367196 MN1Q10571 1320 aaPredicted RBP14.64□□□□□ -0.07
CTSD-202ENST00000367196 ZNF891A8MT65 544 aaPredicted RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 A8MU76 341 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 PDZK1P1A8MUH7 402 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 RAD1O60671 282 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 ANKRD34CP0C6C1 535 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 PIRTP0C851 137 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 TNNT1P13805 278 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 XRCC1P18887 633 aaPredicted RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 MAP4P27816 1152 aaKnown RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 UBE2IP63279 158 aaKnown RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 PRKD1Q15139 912 aaPredicted RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 TBR1Q16650 682 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 ANKS6Q68DC2 871 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 CYB5D1Q6P9G0 228 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 BORAQ6PGQ7 559 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 CRTC3Q6UUV7 619 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 NPNTQ6UXI9 565 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 ADGRG6Q86SQ4 1221 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 BMPERQ8N8U9 685 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 EXD3Q8N9H8 876 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 GPR26Q8NDV2 337 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 BRSK1Q8TDC3 778 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 RTP4Q96DX8 246 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 TEKT5Q96M29 485 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 VAT1Q99536 393 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 CHP1Q99653 195 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 TSPY26PQ9H489 355 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 LUC7LQ9NQ29 371 aaKnown RBP14.63□□□□□ -0.07
CTSD-202ENST00000367196 STARD5Q9NSY2 213 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 HACD3Q9P035 362 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 FAM153AQ9UHL3 310 aa14.63□□□□□ -0.07
CTSD-202ENST00000367196 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
CTSD-202ENST00000367196 AKR1B15C9JRZ8 316 aaPredicted RBP14.62□□□□□ -0.07
CTSD-202ENST00000367196 POLR1CO15160 346 aaPredicted RBP14.62□□□□□ -0.07
CTSD-202ENST00000367196 TOX3O15405 576 aaPredicted RBP14.62□□□□□ -0.07
CTSD-202ENST00000367196 KCNJ13O60928 360 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 CDK14O94921 469 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 MT-CYBP00156 380 aaPredicted RBP14.62□□□□□ -0.07
CTSD-202ENST00000367196 FAM87AP0C7U9 286 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 ZNF7P17097 686 aaPredicted RBP14.62□□□□□ -0.07
CTSD-202ENST00000367196 BPIP17213 487 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 COMTP21964 271 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 PTPN3P26045 913 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 HMGCLP35914 325 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 ARSDP51689 593 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 MFSD7Q6UXD7 560 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 TMEM26Q6ZUK4 368 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 SPATA22Q8NHS9 363 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 GDAP1Q8TB36 358 aa14.62□□□□□ -0.07
CTSD-202ENST00000367196 P3H4Q92791 437 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms