RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ADGRE2Q9UHX3 823 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 CD84Q9UIB8 345 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 SNX7Q9UNH6 387 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 TRAF6Q9Y4K3 522 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 OAS3Q9Y6K5 1087 aaKnown RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 OR1F1O43749 312 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 PLGP00747 810 aaPredicted RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 MAPK12P53778 367 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 OLR1P78380 273 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 FMO1Q01740 532 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 ENPEPQ07075 957 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 SNAPC1Q16533 368 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 EIF1ADQ8N9N8 165 aaKnown RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 LRRC19Q9H756 370 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 HMGXB4Q9UGU5 601 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 FBXW2Q9UKT8 454 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 PCDHB11Q9Y5F2 797 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 BANF1O75531 89 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 GJB1P08034 283 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 ARF4P18085 180 aaPredicted RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 KIR3DL1P43629 444 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 UBAP2LQ14157 1087 aaKnown RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 EML3Q32P44 896 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 UBXN11Q5T124 520 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 C15orf52Q6ZUT6 534 aaKnown RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 MSL3Q8N5Y2 521 aaKnown RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 LNX1Q8TBB1 728 aaPredicted RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 ZCCHC10Q8TBK6 192 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 P2RY11Q96G91 374 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 ZFP37Q9Y6Q3 630 aaPredicted RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 NDST3O95803 873 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 OR4Q2P0C623 313 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 GNALP38405 381 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 SLC5A3P53794 718 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 RASSF5Q8WWW0 418 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 RCN3Q96D15 328 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 C11orf84Q9BUA3 381 aaPredicted RBP15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 P4HA3Q7Z4N8 544 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 CLHC1Q8NHS4 586 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 PSMA8Q8TAA3 256 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 STYXQ8WUJ0 223 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 ART4Q93070 314 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 RHOJQ9H4E5 214 aa15.6■□□□□ 0.09
NUCKS1-201ENST00000367142 SEPT4O43236 478 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 CYP3A5P20815 502 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 ADARP55265 1226 aaKnown RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PRR5P85299 388 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 BST1Q10588 318 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 NAE1Q13564 534 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 EEF1DP3Q658K8 133 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 RNF43Q68DV7 783 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 BICRALQ6AI39 1079 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 FRRS1Q6ZNA5 592 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 CHST4Q8NCG5 386 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 TSTD1Q8NFU3 115 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PIGXQ8TBF5 258 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 TSSK3Q96PN8 268 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 OSBPL11Q9BXB4 747 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 LHX5Q9H2C1 402 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PNPLA3Q9NST1 481 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 INTS10Q9NVR2 710 aaKnown RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 RCOR3Q9P2K3 495 aaPredicted RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 DBIP07108 87 aaKnown RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 IL12AP29459 219 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 AP1S2P56377 157 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 KCTD21Q4G0X4 260 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 FUT10Q6P4F1 479 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PRR23BQ6ZRT6 265 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 HID1Q8IV36 788 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 SEZ6LQ9BYH1 1024 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PHF24Q9UPV7 400 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 BTNL10A8MVZ5 291 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 TP73O15350 636 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 STK16O75716 305 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 ZNF823P16415 610 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 ATP5A1P25705 553 aaKnown RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 CTSOP43234 321 aaPredicted RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PRMT2P55345 433 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 WDR60Q8WVS4 1066 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PLEKHG4BQ96PX9 1271 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 RAB11FIP5Q9BXF6 653 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PCDH18Q9HCL0 1135 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 PADI3Q9ULW8 664 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 DCCP43146 1447 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 WFS1O76024 890 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 FABP3P05413 133 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 DDX6P26196 483 aaKnown RBP eCLIP15.59■□□□□ 0.091e-11■■■□□ 15.6
NUCKS1-201ENST00000367142 EPHA3P29320 983 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 SLC20A2Q08357 652 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM131AQ6UXB0 335 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 TMEM192Q8IY95 271 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 COMMD4Q9H0A8 199 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 CFIP05156 583 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 ANXA4P09525 319 aaPredicted RBP15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 CASP5P51878 434 aa15.59■□□□□ 0.09
NUCKS1-201ENST00000367142 SLC13A2Q13183 592 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms