RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CCDC154A6NI56 674 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 CYBBP04839 570 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 FSHRP23945 695 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 PIGAP37287 484 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CLCQ05315 142 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 FPGSQ05932 587 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 GLYATQ6IB77 296 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 TBC1D21Q8IYX1 336 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 MRGBPQ9NV56 204 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 RIC8BQ9NVN3 520 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 INTS10Q9NVR2 710 aaKnown RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 MIOSQ9NXC5 875 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 ASB1Q9Y576 335 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 PCDHGA8Q9Y5G5 932 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 ZSWIM8A7E2V4 1837 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 CDC7O00311 574 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 CPNE6O95741 557 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 ALDH1A1P00352 501 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 HTR1AP08908 422 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 PRKACGP22612 351 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 ZFP36L2P47974 494 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 DGKQP52824 942 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 GALNT3Q14435 633 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 TSNQ15631 228 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 C1QTNF12Q5T7M4 302 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 BROXQ5VW32 411 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 KLHDC8BQ8IXV7 354 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 OR10Q1Q8NGQ4 319 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 RSPH1Q8WYR4 309 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 SMIM14Q96QK8 99 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 HEPHQ9BQS7 1158 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 FUNDC2Q9BWH2 189 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 TOR3AQ9H497 397 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 RAD21L1Q9H4I0 556 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 POLE4Q9NR33 117 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 PSME2Q9UL46 239 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 UPK1AO00322 258 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 SEC14L2O76054 403 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 INMTO95050 263 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 FCGR1AP12314 374 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 DNASE1L3Q13609 305 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 FSCN1Q16658 493 aaKnown RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 SIRPB2Q5JXA9 342 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 RAB44Q7Z6P3 723 aaPredicted RBP13.48□□□□□ -0.25
PRKN-205ENST00000366897 SDCCAG3Q96C92 435 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 HMCESQ96FZ2 354 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 NSMCE2Q96MF7 247 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 HERC2P3Q9BVR0 1158 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
PRKN-205ENST00000366897 MIA3Q5JRA6 1907 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CCDC162PA2VCL2 907 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 IRAK2O43187 625 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 BCAS1O75363 584 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 WISP3O95389 354 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 IDO1P14902 403 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 ZNF37AP17032 561 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 HTR1BP28222 390 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 TMED10P49755 219 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 SPIDRQ14159 915 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 MAPK11Q15759 364 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CARTPTQ16568 116 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 DNAJC14Q6Y2X3 702 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 CIR1Q86X95 450 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 SPARTQ8N0X7 666 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 TRUB1Q8WWH5 349 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 MRM3Q9HC36 420 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 GALPQ9UBC7 116 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 ZNF225Q9UK10 706 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 A8MU76 341 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 E9PAM4 449 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 TSPAN3O60637 253 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 THRBP10828 461 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 SLC2A3P11169 496 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CRHBPP24387 322 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 GGT5P36269 586 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 BRCC3P46736 316 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 GRSF1Q12849 480 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRKN-205ENST00000366897 RCAN2Q14206 197 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CTU2Q2VPK5 515 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 PGS1Q32NB8 556 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms