RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AQP12BA6NM10 295 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 MYO1GB0I1T2 1018 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 SLC22A2O15244 555 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TEX28O15482 410 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 HOXC11O43248 304 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 HBP1O60381 514 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 DNTTP04053 509 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ATP5F1P24539 256 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AZGP1P25311 298 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 DIO3P55073 304 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 CD47Q08722 323 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 GRSF1Q12849 480 aaKnown RBP eCLIP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 STEAP3Q658P3 488 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 GLYATQ6IB77 296 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ZC3HC1Q86WB0 502 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AQP12AQ8IXF9 295 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ESAMQ96AP7 390 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 C19orf60Q96EN9 201 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 EMILIN2Q9BXX0 1053 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ROGDIQ9GZN7 287 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AMBNQ9NP70 447 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AKIP1Q9NQ31 210 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 FBXO9Q9UK97 447 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ORC6Q9Y5N6 252 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 G3V2T6 193 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 MLNP12872 115 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PTPN3P26045 913 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 OR2B6P58173 313 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 MTPNP58546 118 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 CYP4F2P78329 520 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 NOL9Q5SY16 702 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 FUNDC1Q8IVP5 155 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TBC1D21Q8IYX1 336 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 UBASH3BQ8TF42 649 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PSD2Q9BQI7 771 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF385DQ9H6B1 395 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 WDCPQ9H6R7 721 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PIGVQ9NUD9 493 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 MAP10Q9P2G4 905 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ENPP5Q9UJA9 477 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 N6AMT1Q9Y5N5 214 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 POLR2AP24928 1970 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TMCC2O75069 709 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ENDOD1O94919 500 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 KCNK2O95069 426 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 CST1P01037 141 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PROZP22891 400 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 NAB1Q13506 487 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 GTF2H3Q13889 308 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 DPYSL2Q16555 572 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TWF2Q6IBS0 349 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TXNDC11Q6PKC3 985 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TFAP2DQ7Z6R9 452 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PNPT1Q8TCS8 783 aaKnown RBP12.62□□□□□ -0.39
VAMP1-201ENST00000361716 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 DSN1Q9H410 356 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 ACTR3BQ9P1U1 418 aa12.62□□□□□ -0.39
VAMP1-201ENST00000361716 PIP5K1BO14986 540 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 MDM4O15151 490 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 SSX4O60224 188 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 CPNE3O75131 537 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 BEST1O76090 585 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 RECQL4O94761 1208 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 ALDOCP09972 364 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 SLC6A2P23975 617 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 PIGAP37287 484 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 ATP6V0D1P61421 351 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 NRG1Q02297 640 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 DAG1Q14118 895 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 TAB1Q15750 504 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 FBXO47Q5MNV8 452 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF540Q8NDQ6 660 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 RHOBTB2Q9BYZ6 727 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 FZD8Q9H461 694 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 RHOJQ9H4E5 214 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 UGT2B11O75310 529 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 PRKCAP17252 672 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 ST13P50502 369 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 FRS2Q8WU20 508 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 NUDT8Q8WV74 236 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 SLC35F5Q8WV83 523 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 RHNO1Q9BSD3 238 aa12.61□□□□□ -0.39
VAMP1-201ENST00000361716 INTS10Q9NVR2 710 aaKnown RBP12.61□□□□□ -0.39
VAMP1-201ENST00000361716 AP3D1O14617 1153 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ANGPTL1O95841 491 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms