RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 GCAP28676 217 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 SPRP35270 261 aaPredicted RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 CSE1LP55060 971 aaKnown RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 TMEM115Q12893 351 aaPredicted RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 ADGRD1Q6QNK2 874 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 LRIG3Q6UXM1 1119 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 GCNT7Q6ZNI0 430 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 CEP68Q76N32 757 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 TRIM74Q86UV6 250 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 ZC3HC1Q86WB0 502 aaKnown RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 EPS8L3Q8TE67 593 aaKnown RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 DCAKDQ8WVC6 231 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 LPGAT1Q92604 370 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 FUBP1Q96AE4 644 aaKnown RBP16.8■□□□□ 0.28
LMNA-202ENST00000361308 ATXN7L3BQ96GX2 97 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 COX14Q96I36 57 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 RBBP8Q99708 897 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 DHRS4Q9BTZ2 278 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 CLPBQ9H078 707 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 VIPAS39Q9H9C1 493 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 AASDHPPTQ9NRN7 309 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 ZNF180Q9UJW8 692 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 BPTFQ12830 3046 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 PLXND1Q9Y4D7 1925 aa16.8■□□□□ 0.28
LMNA-202ENST00000361308 TOR1BO14657 336 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 PRMT5O14744 637 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 CDH16O75309 829 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 CDK14O94921 469 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ASMTLO95671 621 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 MYCLP1P12525 358 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 ATP1B2P14415 290 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 FMO4P31512 558 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 DHPSP49366 369 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 ADARP55265 1226 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 PFN3P60673 137 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 YPEL5P62699 121 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ZNF844Q08AG5 666 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ILF2Q12905 390 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 PLK5Q496M5 336 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 CEP85LQ5SZL2 805 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ZNF648Q5T619 568 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 PMS2CLQ68D20 193 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 Q6ZSR6 202 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 FAM174AQ8TBP5 190 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 DNASE2BQ8WZ79 361 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 TMEM109Q9BVC6 243 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ZCCHC2Q9C0B9 1178 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 CCDC68Q9H2F9 335 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 RHOJQ9H4E5 214 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 PSMC3IPQ9P2W1 217 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 TBK1Q9UHD2 729 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ABCA7Q8IZY2 2146 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 IGLV3-16A0A075B6K0 115 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 A6NNZ2 444 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 KRT38O76015 456 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 RHOBTB1O94844 696 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 HOXC4P09017 264 aaPredicted RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 HTR1BP28222 390 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ABCG1P45844 678 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 RABIFP47224 123 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 SERPINB9P50453 376 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 RACK1P63244 317 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 B4GALNT1Q00973 533 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 KHDC1Q4VXA5 237 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 LYSMD4Q5XG99 296 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 KYAT3Q6YP21 454 aaKnown RBP16.79■□□□□ 0.28
LMNA-202ENST00000361308 TAOK1Q7L7X3 1001 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ABI3BPQ7Z7G0 1075 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 CROCCP2Q86T23 111 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 TDRPQ86YL5 185 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 CLDN19Q8N6F1 224 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 VPS39Q96JC1 886 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 SLC6A18Q96N87 628 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 MCMBPQ9BTE3 642 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 TMEM98Q9Y2Y6 226 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 PCDHB1Q9Y5F3 818 aa16.79■□□□□ 0.28
LMNA-202ENST00000361308 MAP2K7O14733 419 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 VEGFDO43915 354 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 KRT37O76014 449 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 SLC34A2O95436 690 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 ESR1P03372 595 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 RPS3P23396 243 aaKnown RBP eCLIP16.78■□□□□ 0.285e-9■■■■□ 20.8
LMNA-202ENST00000361308 THOP1P52888 689 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 LIMK2P53671 638 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 GTF2H3Q13889 308 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 PDE1CQ14123 709 aaPredicted RBP16.78■□□□□ 0.28
LMNA-202ENST00000361308 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
LMNA-202ENST00000361308 KRT71Q3SY84 523 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 DOK6Q6PKX4 331 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 DET1Q7L5Y6 550 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 ADGRG6Q86SQ4 1221 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 GPATCH11Q8N954 259 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
LMNA-202ENST00000361308 KLHDC7BQ96G42 594 aa16.78■□□□□ 0.28
LMNA-202ENST00000361308 ZC3H10Q96K80 434 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms