RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RPIAP49247 311 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 LPAL2Q16609 132 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 TMCO2Q7Z6W1 182 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 ENKURQ8TC29 256 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 NUS1Q96E22 293 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 CILPO75339 1184 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 HLA-EP13747 358 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 AVPR1BP47901 424 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 RPS24P62847 133 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 CACNG1Q06432 222 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 RBM18Q96H35 190 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 MRPS30Q9NP92 439 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 TMCO1Q9UM00 188 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 INSL6Q9Y581 213 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 MPSTP25325 297 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 AMIGO2Q86SJ2 522 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 CAVIN3Q969G5 261 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 NARS2Q96I59 477 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 BHLHE41Q9C0J9 482 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 EPS8L2Q9H6S3 715 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 SEMA3GQ9NS98 782 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 TBC1D30Q9Y2I9 924 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 DBIP07108 87 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 ZBTB6Q15916 424 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 CRY2Q49AN0 593 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 FKBPLQ9UIM3 349 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 LEF1Q9UJU2 399 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 NMBRP28336 390 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 KCTD8Q6ZWB6 473 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 ACTL7BQ9Y614 415 aa20.15■□□□□ 0.82
CDC42BPB-201ENST00000361246 CDH5P33151 784 aaPredicted RBP20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 MAPK12P53778 367 aa20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 SMARCB1Q12824 385 aa20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 C12orf65Q9H3J6 166 aaKnown RBP20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 GDF3Q9NR23 364 aa20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 TLR9Q9NR96 1032 aa20.14■□□□□ 0.82
CDC42BPB-201ENST00000361246 A0A1W2PQ45 241 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 A0A1W2PQY0 241 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 FAM92AA1XBS5 289 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ACTR1BP42025 376 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ACTR1AP61163 376 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 PUS10Q3MIT2 529 aaKnown RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 TRIM40Q6P9F5 258 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 PTCHD4Q6ZW05 846 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 RMND5BQ96G75 393 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 CCSER2Q9H7U1 834 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 KPNA4O00629 521 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 SERPINB7O75635 380 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 RNF19BQ6ZMZ0 732 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 AGXT2Q9BYV1 514 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ZDHHC4Q9NPG8 344 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 CCDC177Q9NQR7 707 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 CTPS2Q9NRF8 586 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 MAGEB3O15480 346 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT2B17O75795 530 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 EOMESO95936 686 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 COX4I1P13073 169 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 RCVRNP35243 200 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 PIK3R6Q5UE93 754 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 CXorf57Q6NSI4 855 aaKnown RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 SMARCD3Q6STE5 483 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 CREG2Q8IUH2 290 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 UNC5BQ8IZJ1 945 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ZNF540Q8NDQ6 660 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 MPP4Q96JB8 637 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 C9orf16Q9BUW7 83 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 EHD3Q9NZN3 535 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 SEC14L3Q9UDX4 400 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 DMTF1Q9Y222 760 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 MAFBQ9Y5Q3 323 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ATP6V1G2O95670 118 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 ARL2P36404 184 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 NCSTNQ92542 709 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 NKD1Q969G9 470 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 QKIQ96PU8 341 aaKnown RBP eCLIP20.14■□□□□ 0.816e-6■■■■□ 20.5
CDC42BPB-201ENST00000361246 ACBD6Q9BR61 282 aa20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 HBS1LQ9Y450 684 aaKnown RBP20.14■□□□□ 0.81
CDC42BPB-201ENST00000361246 B4GALT4O60513 344 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 PYDC2Q56P42 97 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 RCN3Q96D15 328 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 STXBP5LQ9Y2K9 1186 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TNFP01375 233 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 ANKRD7Q92527 254 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 DCLRE1BQ9H816 532 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TEX44Q53QW1 395 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 SPATA6Q9NWH7 488 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 A0A1B0GVM2 712 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TCAF2A6NFQ2 919 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 CNKSR3Q6P9H4 555 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TXNDC11Q6PKC3 985 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 C8orf59Q8N0T1 100 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 INPP4AQ96PE3 977 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 RECQL5O94762 991 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC35G6P0C7Q6 338 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 APLP1P51693 650 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.13■□□□□ 0.811e-6■■■■■ 34
CDC42BPB-201ENST00000361246 DNAJC11Q9NVH1 559 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 FBXL12Q9NXK8 326 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 H3BSH0 61 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms