RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TPPPO94811 219 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CCNB2O95067 398 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ARF5P84085 180 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CCBE1Q6UXH8 406 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 RAB42Q8N4Z0 105 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FNDC11Q9BVV2 318 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TMLHEQ9NVH6 421 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 BAZ2AQ9UIF9 1905 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 C9JVG2 144 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 KCNK1O00180 336 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ATP6V0D1P61421 351 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ADIGQ0VDE8 80 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SMARCB1Q12824 385 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 HYIQ5T013 277 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ACOT1Q86TX2 421 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 BPIFB1Q8TDL5 484 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FCRL4Q96PJ5 515 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FGFBP2Q9BYJ0 223 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SLA2Q9H6Q3 261 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 RPF2Q9H7B2 306 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DYRK1BQ9Y463 629 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FADS2P1A8MWK0 482 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 OR10H3O60404 316 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SERPIND1P05546 499 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MYF6P23409 242 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 C1orf186Q6ZWK4 172 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 R3HCC1LQ7Z5L2 792 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CGREF1Q99674 301 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ZNHIT2Q9UHR6 403 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF536O15090 1300 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 OR2AT4A6NND4 320 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ERN1O75460 977 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SOX10P56693 466 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 RPL7AP62424 266 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KHDRBS2Q5VWX1 349 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GPR180Q86V85 440 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PRR11Q96HE9 360 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 IL17RBQ9NRM6 502 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TBC1D24Q9ULP9 559 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 RNF17Q9BXT8 1623 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 NOS3P29474 1203 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 HADHBP55084 474 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KCNJ11Q14654 390 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MACC1Q6ZN28 852 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MON1BQ7L1V2 547 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 DCP2Q8IU60 420 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SPATA2LQ8IUW3 424 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ABI1Q8IZP0 508 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM176AQ96HP8 235 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 C12orf66Q96MD2 445 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PPIL3Q9H2H8 161 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 UBQLN1Q9UMX0 589 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CLCA2Q9UQC9 943 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TESMINQ9Y4I5 508 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRB3O60242 1522 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ULK1O75385 1050 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 NR2F6P10588 404 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KLRK1P26718 216 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 VEPH1Q14D04 833 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SPATA19Q7Z5L4 167 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MED30Q96HR3 178 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FEM1CQ96JP0 617 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 LGMNQ99538 433 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ALG2Q9H553 416 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SLC38A7Q9NVC3 462 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TAS2R7Q9NYW3 318 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM98Q9Y2Y6 226 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MT-ND2P03891 347 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 T-ENOLP0DO92 83 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PRKAR2AP13861 404 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KLRC2P26717 231 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CLK2P49760 499 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PMS2P3Q13401 168 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 HTATIP2Q9BUP3 242 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ITPAQ9BY32 194 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 COQ3Q9NZJ6 369 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SLIT1O75093 1534 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PRMT3O60678 531 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 OTCP00480 354 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CYP11A1P05108 521 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FAM122CQ6P4D5 195 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 COMMD3Q9UBI1 195 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 RPS6KB2Q9UBS0 482 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 POLIQ9UNA4 740 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CSADQ9Y600 493 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 C2P06681 752 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 STAG3L1P0CL83 205 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ANXA3P12429 323 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 F8A1P23610 371 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SLC6A4P31645 630 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PNPLA4P41247 253 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PLEKHG6Q3KR16 790 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FSTL4Q6MZW2 842 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PEG10Q86TG7 708 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MAP4K3Q8IVH8 894 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 STOML3Q8TAV4 291 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 UTP4Q969X6 686 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 NUSAP1Q9BXS6 441 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms