RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PTPRFP10586 1907 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 IQCF5A8MTL0 148 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 IRAK2O43187 625 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 NIPSNAP2O75323 286 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 C1RP00736 705 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CAPN1P07384 714 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ARNTP27540 789 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SERPINB10P48595 397 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CLCN2P51788 898 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ATP6V0D1P61421 351 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DUSP28Q4G0W2 176 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 NANOGP8Q6NSW7 305 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PRR23BQ6ZRT6 265 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 KIAA0408Q6ZU52 694 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SYTL1Q8IYJ3 562 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DCP1BQ8IZD4 617 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 EID3Q8N140 333 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TERB1Q8NA31 727 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ATG16L2Q8NAA4 619 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SIDT2Q8NBJ9 832 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 OR2T12Q8NG77 320 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TOP1MTQ969P6 601 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ITCHQ96J02 903 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 GPR78Q96P69 363 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SMIM14Q96QK8 99 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 RERGLQ9H628 205 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 NANOGQ9H9S0 305 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 FAM105AQ9NUU6 356 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ATAD3AQ9NVI7 634 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DUS2Q9NX74 493 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SLC27A5Q9Y2P5 690 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 LOC100506127A0A0U1RQW1 187 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 C2orf81A6NN90 581 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TRIM24O15164 1050 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 XPNPEP2O43895 674 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ECI2O75521 394 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CNMDO75829 334 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 FADS2O95864 444 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 BMP2P12643 396 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 GPX3P22352 226 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 FMO3P31513 532 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DNAJB13P59910 316 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MAPKAPK3Q16644 382 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 AP5B1Q2VPB7 878 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ALFQ53S48 1182 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MARCH8Q5T0T0 291 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TTC23Q5W5X9 447 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 LARP4Q71RC2 724 aaKnown RBP eCLIP6.52□□□□□ -1.372e-8■■■□□ 15.4
CSDE1-203ENST00000358528 CCDC103Q8IW40 242 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 RBM12BQ8IXT5 1001 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ADGRG5Q8IZF4 528 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 LGI2Q8N0V4 545 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 KCTD13Q8WZ19 329 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SGCDQ92629 289 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PPP1R2P1Q96PQ5 205 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TRIM62Q9BVG3 475 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 POLR1EQ9GZS1 481 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TOR3AQ9H497 397 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SCN3BQ9NY72 215 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MAP10Q9P2G4 905 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CNOT11Q9UKZ1 510 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PDE10AQ9Y233 779 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SH3BP1Q9Y3L3 701 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ACTL7AQ9Y615 435 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 LRRC37AA6NMS7 1700 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 A0A0G2JLL6 359 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 FUOMA2VDF0 154 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TLR5O60602 858 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 FAM20BO75063 409 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DIRAS1O95057 198 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 DBTP11182 482 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 EFNA1P20827 205 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MATN1P21941 496 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MYF6P23409 242 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ACVRL1P37023 503 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ARCN1P48444 511 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ALDH3B2P48448 385 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 IL2P60568 153 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CYP4F2P78329 520 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CREB5Q02930 508 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CYP4F3Q08477 520 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 NFATC3Q12968 1075 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ARHGEF7Q14155 803 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 CXCL17Q6UXB2 119 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PAGE2Q7Z2X7 111 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PRRT2Q7Z6L0 340 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 HORMAD1Q86X24 394 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TICAM1Q8IUC6 712 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 EPHX4Q8IUS5 362 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM86AQ8N2M4 240 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 RTL3Q8N8U3 475 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ATP6V0D2Q8N8Y2 350 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SH3RF2Q8TEC5 729 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SERPINB11Q96P15 392 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 ZYG11BQ9C0D3 744 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 AMBNQ9NP70 447 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 SACM1LQ9NTJ5 587 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 MIOSQ9NXC5 875 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms