RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HSPB11Q9Y547 144 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 SCN8AQ9UQD0 1980 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 FPGTO14772 594 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 NPHS1O60500 1241 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CYP11A1P05108 521 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 LIMK2P53671 638 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 LCP2Q13094 533 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 TGFBIQ15582 683 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 HECTD3Q5T447 861 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 DRICH1Q6PGQ1 229 aaPredicted RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 RPTNQ6XPR3 784 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 TRIM48Q8IWZ4 208 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 LSM14AQ8ND56 463 aaKnown RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 HDAC2Q92769 488 aaKnown RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 FCRL4Q96PJ5 515 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 TAAR1Q96RJ0 339 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 GAD1Q99259 594 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 USP17L7P0C7H9 530 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 UROSP10746 265 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 ACADLP28330 430 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 TUBB3Q13509 450 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 FAM20CQ8IXL6 584 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 GRIP1Q9Y3R0 1128 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 ANKDD1BA6NHY2 528 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 SPTLC1O15269 473 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 ABCB7O75027 752 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 APOC1P02654 83 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 TFPTP0C1Z6 253 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 S100GP29377 79 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 BUD31P41223 144 aaPredicted RBP8.71□□□□□ -1.02
COL6A6-201ENST00000358511 DLG2Q15700 870 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 LYPLAL1Q5VWZ2 237 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 CARNMT1Q8N4J0 409 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 IFNGP01579 166 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 HLA-DQA2P01906 255 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 KIR3DL1P43629 444 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 CLCN3P51790 818 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 TCEAL5Q5H9L2 206 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 DEFB106AQ8N104 65 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 CNPPD1Q9BV87 410 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 FBXO5Q9UKT4 447 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 MAB21L2Q9Y586 359 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 DISP2A7MBM2 1401 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 A0A0J9YVX5 310 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 MNDAP41218 407 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 CPT1AP50416 773 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 MXD1Q05195 221 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 ZFP28Q8NHY6 868 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 CREB3L1Q96BA8 519 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 ZSCAN5AQ9BUG6 496 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 SEMA3GQ9NS98 782 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 SNTG1Q9NSN8 517 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 VWA7Q9Y334 891 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 FER1L4A9Z1Z3 1794 aa8.71□□□□□ -1.02
COL6A6-201ENST00000358511 FAM86C2PA6NEL3 165 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CENPBD1B2RD01 187 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TNFRSF11BO00300 401 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 PITPNM1O00562 1244 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 OR7A10O76100 309 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SLC25A27O95847 323 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SOX10P56693 466 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ADAM15Q13444 863 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF404Q494X3 552 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ASCC3Q8N3C0 2202 aaKnown RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 DHX15O43143 795 aaKnown RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NOBOXO60393 691 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 BCAS2O75934 225 aaPredicted RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 EGFRP00533 1210 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NR2F1P10589 423 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 FMO3P31513 532 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ARFIP1P53367 373 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CBLBQ13191 982 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 OCLNQ16625 522 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 MTSS1LQ765P7 747 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 RANBP3Q9H6Z4 567 aaPredicted RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJB9Q9UBS3 223 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 GCATO75600 419 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJB5O75953 348 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TGFB3P10600 412 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SLC6A4P31645 630 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 S100A12P80511 92 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 KCTD7Q96MP8 289 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 EBF4Q9BQW3 602 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 EML1O00423 815 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ASMTP46597 345 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NOMO1Q15155 1222 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NFE2Q16621 373 aaPredicted RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CLEC6AQ6EIG7 209 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ANKRD26P1Q6NSI1 321 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 MARVELD2Q8N4S9 558 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms