RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 FAM237AA0A1B0GTK4 181 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 IQCMA0A1B0GVH7 501 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 A0A1W2PQH9 124 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SERPINA3P01011 423 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 C9P02748 559 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RLN1P04808 185 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ABCG1P45844 678 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ERVK-21P61565 698 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PPP2R2BQ00005 443 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PITPNAQ00169 270 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RASGEF1BQ0VAM2 473 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ILF3Q12906 894 aaKnown RBP eCLIP6.42□□□□□ -1.38
UPF2-201ENST00000356352 PPIGQ13427 754 aaKnown RBP eCLIP6.42□□□□□ -1.381e-6■■■■□ 24.4
UPF2-201ENST00000356352 IL18R1Q13478 541 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 IL18Q14116 193 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 NOMO1Q15155 1222 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 DEFB115Q30KQ5 88 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TEX44Q53QW1 395 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SLC26A9Q7LBE3 791 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ADGRG6Q86SQ4 1221 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 OR2T34Q8NGX1 318 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 OR2T3Q8NH03 318 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SNX33Q8WV41 574 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 DCAKDQ8WVC6 231 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 MGME1Q9BQP7 344 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 GSDMCQ9BYG8 508 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PCDH18Q9HCL0 1135 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 THUMPD1Q9NXG2 353 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 GMEB1Q9Y692 573 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TCRBV9S1A1TA0A576 114 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 METTL21EPA6NDL7 271 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ZNF208O43345 1280 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 B4GALT4O60513 344 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SNX4O95219 450 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 METTL18O95568 372 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ITGA3P26006 1051 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MTHFRP42898 656 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 NDST2P52849 883 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ARF5P84085 180 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CTBP1Q13363 440 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ACAP2Q15057 778 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PRKD1Q15139 912 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 TYSND1Q2T9J0 566 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CHADLQ6NUI6 762 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PGBD2Q6P3X8 592 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ULK3Q6PHR2 472 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ZYG11AQ6WRX3 759 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 THAP5Q7Z6K1 395 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 P2RY11Q96G91 374 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TLE6Q9H808 572 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CHMP1AQ9HD42 196 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 TRPV5Q9NQA5 729 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TAS2R14Q9NYV8 317 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PDP1Q9P0J1 537 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 PCDHGB7Q9Y5F8 929 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 DIP2CQ9Y2E4 1556 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PRORSD1PA6NEY8 169 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RHPN2P1A8MT19 583 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 H3BNX3 289 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TNFRSF11BO00300 401 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 BCKDKO14874 412 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PSIP1O75475 530 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 STK16O75716 305 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PRPS2P11908 318 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CCL23P55773 120 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RGS8P57771 180 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 ABATP80404 500 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 LIPEQ05469 1076 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 INAVAQ3KP66 663 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ATAT1Q5SQI0 421 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PPP1R26Q5T8A7 1209 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 GPR107Q5VW38 600 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MSANTD2Q6P1R3 559 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 FOXR1Q6PIV2 292 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 LCLAT1Q6UWP7 414 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 IQCF2Q8IXL9 164 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 NATD1Q8N6N6 113 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MAB21L3Q8N8X9 362 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MCFD2Q8NI22 146 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 BRSK1Q8TDC3 778 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 LPPQ93052 612 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SLC4A9Q96Q91 983 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 LGMNQ99538 433 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RAI2Q9Y5P3 530 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SQORQ9Y6N5 450 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CEP170BQ9Y4F5 1589 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 ELOVL7A1L3X0 281 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 YDJCA8MPS7 323 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CALCAP01258 141 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SHBGP04278 402 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 S100A6P06703 90 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TAL1P17542 331 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 PSMA1P25786 263 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 EPHA3P29320 983 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CORO1AP31146 461 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 TNFSF9P41273 254 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 BLKP51451 505 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms