RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ATXN10Q9UBB4 475 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CPNE7Q9UBL6 633 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 SHOC2Q9UQ13 582 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 B3GALT1Q9Y5Z6 326 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KMOO15229 486 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 VIPP01282 170 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 KRT1P04264 644 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ZNF8P17098 575 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-204ENST00000356316 VCLP18206 1134 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 MAP4P27816 1152 aaKnown RBP10.53□□□□□ -0.72
CAPN3-204ENST00000356316 CSF2RBP32927 897 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 SLC1A1P43005 524 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 NR2C2P49116 596 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 DYNLT1P63172 113 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 MC2RQ01718 297 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ZBTB17Q13105 803 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 TFDP2Q14188 446 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 INSCQ1MX18 579 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-204ENST00000356316 LRRC38Q5VT99 294 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ANKS6Q68DC2 871 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 PDPK2PQ6A1A2 396 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 SLC9A4Q6AI14 798 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 TMC3Q7Z5M5 1100 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 TRAM1L1Q8N609 369 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 TTC25Q96NG3 672 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 WDR24Q96S15 920 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 EFHD1Q9BUP0 239 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 FBXO8Q9NRD0 319 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 KLC4Q9NSK0 619 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 ABHD10Q9NUJ1 306 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 KLHL3Q9UH77 587 aa10.53□□□□□ -0.72
CAPN3-204ENST00000356316 A0A0A6YYK5 440 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 POLR1CO15160 346 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 SPOPO43791 374 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 VEGFDO43915 354 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 RAD1O60671 282 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 PMPCBO75439 489 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CDK14O94921 469 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 NDST3O95803 873 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 PIRTP0C851 137 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 LIFP15018 202 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 AMD1P17707 334 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 XRCC1P18887 633 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CCR10P46092 362 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CLCNKAP51800 687 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 DCDC1P59894 354 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GTF2H3Q13889 308 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 TEX44Q53QW1 395 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF648Q5T619 568 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 BORAQ6PGQ7 559 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 NPNTQ6UXI9 565 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 LRRTM4Q86VH4 590 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 NLGN4XQ8N0W4 816 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GPR26Q8NDV2 337 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 NLGN4YQ8NFZ3 816 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GDAP1Q8TB36 358 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GLYATL1Q969I3 302 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CHP1Q99653 195 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CTRCQ99895 268 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 TRIT1Q9H3H1 467 aaKnown RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 CLMPQ9H6B4 373 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 GLOD4Q9HC38 313 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 SPTLC3Q9NUV7 552 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF711Q9Y462 761 aa10.52□□□□□ -0.73
CAPN3-204ENST00000356316 PCYT1BQ9Y5K3 369 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-204ENST00000356316 SDK2Q58EX2 2172 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 C3orf70A6NLC5 250 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 MTSS1O43312 755 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 PPFIA2O75334 1257 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 UBXN7O94888 489 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 MT-CYBP00156 380 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 WT1P19544 449 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 IDSP22304 550 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ARSDP51689 593 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 FOXM1Q08050 763 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 SLC14A2Q15849 920 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ZDHHC20Q5W0Z9 365 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 CRTC3Q6UUV7 619 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ATG14Q6ZNE5 492 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 B4GALNT4Q76KP1 1039 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ADGRG6Q86SQ4 1221 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 CNGA4Q8IV77 575 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 SPATA22Q8NHS9 363 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 BRSK1Q8TDC3 778 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 P3H4Q92791 437 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 PMEPA1Q969W9 287 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 EID2BQ96D98 161 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 RTP4Q96DX8 246 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms