RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NOL4O94818 638 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 NELFEP18615 380 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 MRPS6P82932 125 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 RALGPS2Q86X27 583 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SYN2Q92777 582 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 PURBQ96QR8 312 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 HIF3AQ9Y2N7 669 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ARL5AQ9Y689 179 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 OR14I1A6ND48 311 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 FGF10O15520 208 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CBFA2T3O75081 653 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CMPK1P30085 196 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SREBF1P36956 1147 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CD47Q08722 323 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 GRB10Q13322 594 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ARHGEF17Q96PE2 2063 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 DHFRP00374 187 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 UGT2B4P06133 528 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 RPL14P50914 215 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 LINGO4Q6UY18 593 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CCDC36Q8IYA8 594 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 C11orf16Q9NQ32 467 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 TRPV5Q9NQA5 729 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 NR2E1Q9Y466 385 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 JCADQ9P266 1359 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 TTC3P53804 2025 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 F8VP50 259 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ATP6V1G2O95670 118 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 IL7RP16871 459 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 PCBP2Q15366 365 aaKnown RBP eCLIP17.15■□□□□ 0.346e-7■■■□□ 16.1
COL27A1-201ENST00000356083 PAPD7Q5XG87 772 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 TTC29Q8NA56 475 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 TSSK3Q96PN8 268 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 MTFR1LQ9H019 292 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SPAG4Q9NPE6 437 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 UCKL1Q9NWZ5 548 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CLCA3PQ9Y6N3 262 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 FAM227AF5H4B4 570 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 C1RP00736 705 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 GNPDA1P46926 289 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SLC34A1Q06495 639 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 USP4Q13107 963 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 LINGO2Q7L985 606 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 HJURPQ8NCD3 748 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 CLPTM1LQ96KA5 538 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ANXA2P2A6NMY6 339 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 WASHC1A8K0Z3 465 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 WASH3PC4AMC7 463 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SSX5O60225 188 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ANXA2P07355 339 aaKnown RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 POU2F1P14859 743 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ADSSP30520 456 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SEPHS1P49903 392 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ATP13A5Q4VNC0 1218 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 SLC9B1Q4ZJI4 515 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 NOXRED1Q6NXP6 359 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 WASH2PQ6VEQ5 465 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 QSOX2Q6ZRP7 698 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 FAM183BPQ6ZVS7 135 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF350Q9GZX5 532 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
COL27A1-201ENST00000356083 LEF1Q9UJU2 399 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-201ENST00000356083 HACD1B0YJ81 288 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 ITGA5P08648 1049 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 BNIP3Q12983 259 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 OR4L1Q8NH43 312 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 BSNDQ8WZ55 320 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 COPS5Q92905 334 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 TBC1D17Q9HA65 648 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 DNAJC28Q9NX36 388 aa17.14■□□□□ 0.34
COL27A1-201ENST00000356083 KIAA1522Q9P206 1035 aaPredicted RBP17.14■□□□□ 0.34
COL27A1-201ENST00000356083 J3QRK9 145 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 CLCA4Q14CN2 919 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ZBTB8BQ8NAP8 495 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 HMGB4Q8WW32 186 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ASB12Q8WXK4 309 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 HPS1Q92902 700 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 EBPLQ9BY08 206 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 PTX3P26022 381 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 PCID2Q5JVF3 399 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ANXA8L1Q5VT79 327 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 VITQ6UXI7 678 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF410Q86VK4 478 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 RBFAQ8N0V3 343 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 MTRRQ9UBK8 725 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 C9J4A7 227 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 LHCGRP22888 699 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 PLEKHG4Q58EX7 1191 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 DCBLD1Q8N8Z6 715 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF548Q8NEK5 533 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 LRRC46Q96FV0 321 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 MFSD14AQ96MC6 490 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 WDR77Q9BQA1 342 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms