RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RPL10LQ96L21 214 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 C12orf65Q9H3J6 166 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 TMCC2O75069 709 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 LRIG2O94898 1065 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 PAX7P23759 505 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 RPIAP49247 311 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CLDN9O95484 217 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 LMO2P25791 158 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CDKN2BP42772 138 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 PLEKHG4Q58EX7 1191 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF730Q6ZMV8 503 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CPT1BQ92523 772 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SSR3Q9UNL2 185 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 AP2A1O95782 977 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF567Q8N184 647 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 PTPN18Q99952 460 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 INSIG1O15503 277 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 GIMD1P0DJR0 217 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SAGP10523 405 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PTPN2P17706 415 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CDH3P22223 829 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SLC26A3P40879 764 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 KIR3DL1P43629 444 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 LILRA4P59901 499 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 DPEP2Q9H4A9 486 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CACNG4Q9UBN1 327 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PRPF19Q9UMS4 504 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CCDC182A6NF36 153 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 KCNU1A8MYU2 1149 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SYN3O14994 580 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MT-CYBP00156 380 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 GOT2P00505 430 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ACRP10323 421 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TTKP33981 857 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CTSKP43235 329 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CYP4F8P98187 520 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CAP1Q01518 475 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 BNC1Q01954 994 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ZBTB6Q15916 424 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 NDUFA9Q16795 377 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 UTS2BQ765I0 119 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SERPINA9Q86WD7 417 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SLC34A3Q8N130 599 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 POC5Q8NA72 575 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 METTL21AQ8WXB1 218 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 OSBPL11Q9BXB4 747 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PCDHGB3Q9Y5G1 929 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 GPC6Q9Y625 555 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TCEA1P23193 301 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 VPS26BQ4G0F5 336 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 LRRC73Q5JTD7 316 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 DAW1Q8N136 415 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 HOPXQ9BPY8 73 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 KLF15Q9UIH9 416 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 FOXO6A8MYZ6 492 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TRAFD1O14545 582 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ICAM3P32942 547 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 FASTKD3Q14CZ7 662 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 OAFQ86UD1 273 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 HPS6Q86YV9 775 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SIDT2Q8NBJ9 832 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 FCRL4Q96PJ5 515 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms