RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SPRYD7Q5W111 196 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ALG1LQ6GMV1 187 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 DUS1LQ6P1R4 473 aaKnown RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 OR2T11Q8NH01 316 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 C8orf48Q96LL4 319 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 TMEM74Q96NL1 305 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 PDFQ9HBH1 243 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 NLE1Q9NVX2 485 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 NPEPPSL1A6NEC2 478 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 TRIM64BA6NI03 449 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 UROSP10746 265 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 POLR2JP52435 117 aaKnown RBP24.33■■□□□ 1.49
CPNE1-202ENST00000352393 YTHDF1Q9BYJ9 559 aaKnown RBP24.33■■□□□ 1.49
CPNE1-202ENST00000352393 POLR1BQ9H9Y6 1135 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 INTS7Q9NVH2 962 aaKnown RBP24.33■■□□□ 1.49
CPNE1-202ENST00000352393 SLAMF8Q9P0V8 285 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 USP22Q9UPT9 525 aa24.33■■□□□ 1.49
CPNE1-202ENST00000352393 MOXD2PA6NHM9 499 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 TMX2-CTNND1H3BSU7 103 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 MAGEB3O15480 346 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 SNAP29O95721 258 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 IGHA2P01877 340 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 FMO4P31512 558 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 YBEYP58557 167 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 ERVK-8P63133 956 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 FUT11Q495W5 492 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 TIGD2Q4W5G0 525 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 PYCR3Q53H96 274 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 NANOGP8Q6NSW7 305 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 TERB1Q8NA31 727 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 ABTB1Q969K4 478 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 ISG20Q96AZ6 181 aaKnown RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 RPRD1AQ96P16 312 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 NANOGQ9H9S0 305 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 ZIM2Q9NZV7 527 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 SNX2O60749 519 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 NDST3O95803 873 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 ENO2P09104 434 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 IL12AP29459 219 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 AGTR2P50052 363 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 UGT3A1Q6NUS8 523 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 CXCL17Q6UXB2 119 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 MAGEE2Q8TD90 523 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 BPIFB1Q8TDL5 484 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 BIRC7Q96CA5 298 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 SOX17Q9H6I2 414 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-202ENST00000352393 TMEM45AQ9NWC5 275 aa24.32■■□□□ 1.48
CPNE1-202ENST00000352393 FAM234BA2RU67 622 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 B4GALT3O60512 393 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 KPNA6O60684 536 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 MLYCDO95822 493 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 TBX18O95935 607 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 CHEK2O96017 543 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 MAPKAPK2P49137 400 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 EMX2Q04743 252 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 TXNDC11Q6PKC3 985 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 AFTPHQ6ULP2 937 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 Q6ZNX1 250 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 PROSER1Q86XN7 944 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 MYEOVQ96EZ4 313 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 FUBP3Q96I24 572 aaKnown RBP eCLIP24.31■■□□□ 1.48
CPNE1-202ENST00000352393 GPR21Q99679 349 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 C1orf50Q9BV19 199 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 SPO11Q9Y5K1 396 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 GIPC1O14908 333 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 IGLV3-27P01718 113 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 MT-ND1P03886 318 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 SERPINF2P08697 491 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 CES1P23141 567 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 OR1E1P30953 314 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 HLCSP50747 726 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 GPR107Q5VW38 600 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 KCTD8Q6ZWB6 473 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 CPNE9Q8IYJ1 553 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 ADAM2Q99965 735 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 TBCCD1Q9NVR7 557 aa24.31■■□□□ 1.48
CPNE1-202ENST00000352393 GRXCR2A6NFK2 248 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 H0YAE9 185 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 BTN3A1O00481 513 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 SOAT2O75908 522 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 NPPAP01160 153 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 AKR1A1P14550 325 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 HMOX2P30519 316 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 GRK4P32298 578 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 OR4D2P58180 307 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 C16orf72Q14CZ0 275 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 CCNYL2Q5T2Q4 361 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 TBPL2Q6SJ96 375 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 TMEM26Q6ZUK4 368 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 MIB1Q86YT6 1006 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 RIMKLAQ8IXN7 391 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 LEMD2Q8NC56 503 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 VPS50Q96JG6 964 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 FAM210AQ96ND0 272 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 LRRC3Q9BY71 257 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 CCDC68Q9H2F9 335 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 ZFYVE28Q9HCC9 887 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 IL37Q9NZH6 218 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 PKD2L2Q9NZM6 624 aa24.3■■□□□ 1.48
CPNE1-202ENST00000352393 SUN2Q9UH99 717 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms