RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GEN1Q17RS7 908 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 MYLK3Q32MK0 819 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 GPR33Q49SQ1 333 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 AGKQ53H12 422 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 PTRHD1Q6GMV3 140 aaKnown RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 FAM151BQ6UXP7 276 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 GK5Q6ZS86 529 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF483Q8TF39 744 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 TWIST2Q8WVJ9 160 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 CCDC124Q96CT7 223 aaKnown RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 LBHD1Q9BQE6 289 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 NUSAP1Q9BXS6 441 aaKnown RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 SMG9Q9H0W8 520 aaKnown RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 GNPTGQ9UJJ9 305 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 SLC25A13Q9UJS0 675 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 PPP6CO00743 305 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 GAPDHSO14556 408 aaPredicted RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SORBS2O94875 1100 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 BAG2O95816 211 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SNRPB2P08579 225 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 GKP32189 559 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 BMPR1AP36894 532 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SPAM1P38567 509 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PIGGQ5H8A4 983 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 TCHHL1Q5QJ38 904 aaPredicted RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PLPP4Q5VZY2 271 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 EFCAB3Q8N7B9 438 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 HMGCLL1Q8TB92 370 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SLC26A7Q8TE54 656 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 C3orf30Q96M34 536 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 RAD9AQ99638 391 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SLC25A23Q9BV35 468 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 CPEB1Q9BZB8 566 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 AKTIPQ9H8T0 292 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SARS2Q9NP81 518 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 IL26Q9NPH9 171 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 HCFC1R1Q9NWW0 138 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 NUDT4Q9NZJ9 180 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 CD274Q9NZQ7 290 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PPIL1Q9Y3C6 166 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 GLYATL1P3A0A0U1RQE8 302 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PIP5K1BO14986 540 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 CFLARO15519 480 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 BPIP17213 487 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 HLA-FP30511 346 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 CTSOP43234 321 aaPredicted RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 NFATC2Q13469 925 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF423Q2M1K9 1284 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 C22orf39Q6P5X5 142 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 TPRG1Q6ZUI0 275 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 OR56A4Q8NGH8 313 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 NPAS2Q99743 824 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SUV39H2Q9H5I1 410 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SEMA4BQ9NPR2 832 aaPredicted RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 MRPL40Q9NQ50 206 aaKnown RBP16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PFDN4Q9NQP4 134 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PCTPQ9UKL6 214 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 PPM1HQ9ULR3 514 aa16.53■□□□□ 0.24
SAMM50-201ENST00000350028 SCN8AQ9UQD0 1980 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 A0A1W2PQ67 120 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 IQCF5A8MTL0 148 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 HIDE1A8MVS5 230 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 CRCPO75575 148 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 LBPP18428 481 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 ME2P23368 584 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 ACRV1P26436 265 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 CTNNB1P35222 781 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 RGS4P49798 205 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 HK3P52790 923 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 DMC1Q14565 340 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 TEAD2Q15562 447 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 MMEL1Q495T6 779 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 FUT11Q495W5 492 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 CARD16Q5EG05 197 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 ADAMTSL2Q86TH1 951 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 DDIASQ8IXT1 998 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 LEMD2Q8NC56 503 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 ECHDC3Q96DC8 303 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 SCRN2Q96FV2 425 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 HGH1Q9BTY7 390 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 BATF3Q9NR55 127 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 CRLS1Q9UJA2 301 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 SARDHQ9UL12 918 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 CCL26Q9Y258 94 aa16.52■□□□□ 0.24
SAMM50-201ENST00000350028 ATP6AP2A0A1C7CYW4 349 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 NCF1BA6NI72 391 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 NCF1CA8MVU1 366 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 GPR39O43194 453 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 MOSPD3O75425 235 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ATP6AP2O75787 350 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 POP4O95707 220 aaKnown RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ESRRBO95718 433 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 UROSP10746 265 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms