RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ADORA3P0DMS8 318 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TNNI3P19429 210 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 GNA15P30679 374 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CSTF2P33240 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SHMT1P34896 483 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SLC15A1P46059 708 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TEKQ02763 1124 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 FAM83AQ86UY5 434 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 RETREG3Q86VR2 466 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PHF13Q86YI8 300 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 MICU2Q8IYU8 434 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 YIPF7Q8N8F6 280 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 OR8K3Q8NH51 312 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CNIH3Q8TBE1 160 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 MCOLN3Q8TDD5 553 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SDHCQ99643 169 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 RSPH9Q9H1X1 276 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SMURF2Q9HAU4 748 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TMEM8AQ9HCN3 771 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ASNSD1Q9NWL6 643 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 B3GNT2Q9NY97 397 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 DTLQ9NZJ0 730 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PRR12Q9ULL5 1215 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 MEIS2O14770 477 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 NOBOXO60393 691 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 FADS2O95864 444 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 HLA-DRAP01903 254 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PROS1P07225 676 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SNRPB2P08579 225 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ERVK-10P10266 1014 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 RPL17P18621 184 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CHRM3P20309 590 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CD6P30203 668 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 GLRBP48167 497 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CLK1P49759 484 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SLC25A11Q02978 314 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 BSPRYQ5W0U4 402 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TYW3Q6IPR3 259 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ENOSF1Q7L5Y1 443 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TRMT1LQ7Z2T5 733 aaKnown RBP10.58□□□□□ -0.72
CAPN3-203ENST00000349748 C16orf62Q7Z3J2 963 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF677Q86XU0 584 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TAGAPQ8N103 731 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PJA1Q8NG27 643 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SIPA1Q96FS4 1042 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 ELMO2Q96JJ3 720 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TWNKQ96RR1 684 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 FEM1AQ9BSK4 669 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 OXSMQ9NWU1 459 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 IL20Q9NYY1 176 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 DPP7Q9UHL4 492 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PCDHA1Q9Y5I3 950 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 FER1L6Q2WGJ9 1857 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SMCHD1A6NHR9 2005 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CYP3A7P24462 503 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ERP29P30040 261 aaKnown RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 UGT2B10P36537 528 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 GTF2A2P52657 109 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CLCA4Q14CN2 919 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ACOX1Q15067 660 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 STXBP2Q15833 593 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 DENND5AQ6IQ26 1287 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 TMPRSS9Q7Z410 1059 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ERO1BQ86YB8 467 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 HS3ST5Q8IZT8 346 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 OR8H3Q8N146 312 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 KIAA1958Q8N8K9 716 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CRYGNQ8WXF5 182 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 OR2A14Q96R47 310 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 HSD17B14Q9BPX1 270 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 AMBRA1Q9C0C7 1298 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 SAV1Q9H4B6 383 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 NGRNQ9NPE2 291 aaKnown RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 C1orf112Q9NSG2 853 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 RNF181Q9P0P0 153 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 PCDHGB3Q9Y5G1 929 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 COL4A5P29400 1685 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 LRCH4O75427 683 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 METTL18O95568 372 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ALPLP05186 524 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CD36P16671 472 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ITGA2P17301 1181 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 CYP3A5P20815 502 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 PSMA2P25787 234 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 MASP1P48740 699 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF45Q02386 682 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 PRKAA1Q13131 559 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 SYT16Q17RD7 645 aa10.57□□□□□ -0.72
CAPN3-203ENST00000349748 SOWAHCQ53LP3 525 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
CAPN3-203ENST00000349748 LAMTOR1Q6IAA8 161 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms