RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 UNC93AQ86WB7 457 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 HIPK1Q86Z02 1210 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PSTKQ8IV42 348 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 LIN28AQ9H9Z2 209 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 OPTCQ9UBM4 332 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ANAPC2Q9UJX6 822 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 NDUFAF1Q9Y375 327 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TOR1BO14657 336 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TLL1O43897 1013 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TSPAN8P19075 237 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PPP2R1BP30154 601 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 USP43Q70EL4 1123 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF605Q86T29 641 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM124AQ86V42 546 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 OR6K2Q8NGY2 324 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TBC1D15Q8TC07 691 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 UGT2B28Q9BY64 529 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TMEM9Q9P0T7 183 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SEC14L4Q9UDX3 406 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CNOT11Q9UKZ1 510 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CCDC85CA6NKD9 419 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 KLRC4O43908 158 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 MSCO60682 206 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ADRA1DP25100 572 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 GTF2E2P29084 291 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 EVI2BP34910 448 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PSMD4P55036 377 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SERPINA13PQ6UXR4 307 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CCDC185Q8N715 623 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PWWP2AQ96N64 755 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PANX3Q96QZ0 392 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 NLNQ9BYT8 704 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CA5BQ9Y2D0 317 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 OIP5O43482 229 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 OR6B1O95007 311 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 IL1BP01584 269 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 PROS1P07225 676 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 GPR15P49685 360 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 CCR4P51679 360 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 CRYBB1P53674 252 aaPredicted RBP11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 RPL7AP62424 266 aaKnown RBP11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 RPP38P78345 283 aaKnown RBP11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 STX4Q12846 297 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 CAMK1Q14012 370 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 ADGRE1Q14246 886 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 PSMD5Q16401 504 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 MTX3Q5HYI7 312 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 FGD3Q5JSP0 725 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 COLEC12Q5KU26 742 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 C15orf52Q6ZUT6 534 aaKnown RBP11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF598Q86UK7 904 aaKnown RBP11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 METTL4Q8N3J2 472 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 SLC4A11Q8NBS3 891 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 ETNPPLQ8TBG4 499 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 COL26A1Q96A83 441 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 KLQ9UEF7 1012 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 LIMD1Q9UGP4 676 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 RIPK3Q9Y572 518 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF541Q9H0D2 1346 aa11.02□□□□□ -0.64
SMARCE1-202ENST00000348513 A0A0B4J269 797 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 DCXO43602 365 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 TBX10O75333 385 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PVALBP20472 110 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 NOS3P29474 1203 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 Q3ZCU0 254 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 HLA-DQA1Q5Y7H0 255 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 NEPROQ6NW34 567 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 DCDC5Q6ZRR9 648 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 SYT12Q8IV01 421 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM126BQ8IXS8 530 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 CFAP52Q8N1V2 620 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF557Q8N988 423 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 USP7Q93009 1102 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 LPIN3Q9BQK8 851 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 RTKNQ9BST9 563 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ANKMY1Q9P2S6 941 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PTBP2Q9UKA9 531 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ANKRD6Q9Y2G4 727 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 GSTK1Q9Y2Q3 226 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 FGF10O15520 208 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 NDUFS2O75306 463 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 OGNP20774 298 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 SSTP61278 116 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 DPY19L3Q6ZPD9 716 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ZCCHC9Q8N567 271 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms