RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 IRAK2O43187 625 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 PIGRP01833 764 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 GSTM5P46439 218 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 SPIBQ01892 262 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 FAM180AQ6UWF9 173 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 KIAA0408Q6ZU52 694 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 TTLL2Q9BWV7 592 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 EQTNQ9NQ60 294 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 IKZF3Q9UKT9 509 aa18.49■□□□□ 0.55
UBE3C-201ENST00000348165 ENPEPQ07075 957 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 CWF19L1Q69YN2 538 aaKnown RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 DNAJB7Q7Z6W7 309 aaPredicted RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 TWIST2Q8WVJ9 160 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 EZH1Q92800 747 aaPredicted RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 MAT2BQ9NZL9 334 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 MRPS33Q9Y291 106 aaKnown RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 U3KQV3 271 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 SNED1Q8TER0 1413 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 LSM1O15116 133 aaKnown RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 RASGRP1O95267 797 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 ATP12AP54707 1039 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 TRIM71Q2Q1W2 868 aaKnown RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 TRIQKQ629K1 86 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 CPNE9Q8IYJ1 553 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 UXS1Q8NBZ7 420 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 FNDC11Q9BVV2 318 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 EVA1BQ9NVM1 165 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 H0YC42 278 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 NRLP54845 237 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 RGS21Q2M5E4 152 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 CCNYL2Q5T2Q4 361 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 KLHL35Q6PF15 583 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 CLNKQ7Z7G1 428 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF554Q86TJ5 538 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 GPR135Q8IZ08 494 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 SUV39H1O43463 412 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 CBFA2T3O75081 653 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 METTL18O95568 372 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 BMP7P18075 431 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 HADHBP55084 474 aaKnown RBP18.48■□□□□ 0.55
UBE3C-201ENST00000348165 PCDHGA4Q9Y5G9 962 aa18.48■□□□□ 0.55
UBE3C-201ENST00000348165 KIR3DL1P43629 444 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 TAS2R39P59534 338 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 TRAF3Q13114 568 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 TAF13Q15543 124 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF57Q68EA5 555 aaPredicted RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 BRSK1Q8TDC3 778 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 CYP2S1Q96SQ9 504 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 POLE3Q9NRF9 147 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 CCNYL3P0C7X3 344 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 IL1R2P27930 398 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 CLCQ05315 142 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 IL23RQ5VWK5 629 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 GALNT13Q8IUC8 556 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 CACTIN-AS1Q8N1I8 211 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 CPSF7Q8N684 471 aaKnown RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 PRPF19Q9UMS4 504 aaKnown RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 RWDD3Q9Y3V2 267 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 GRIN2DO15399 1336 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 A0A0U1RQF3 1178 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 SCN2BO60939 215 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 GJA1P17302 382 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 DPYSL2Q16555 572 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 RALGPS2Q86X27 583 aaPredicted RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 TCAIMQ8N3R3 496 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 HERVK_113Q902F9 699 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF607Q96SK3 696 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 PLGRKTQ9HBL7 147 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 ERVW-1Q9UQF0 538 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 PLIN3O60664 434 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 RALGDSQ12967 914 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 ITGADQ13349 1161 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 SPANXN2Q5MJ10 180 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 ADGRG2Q8IZP9 1017 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 SMYD1Q8NB12 490 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 C2orf15Q8WU43 125 aaKnown RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 GATA5Q9BWX5 397 aaPredicted RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 REXO4Q9GZR2 422 aaKnown RBP18.47■□□□□ 0.55
UBE3C-201ENST00000348165 SLITRK2Q9H156 845 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 MIOSQ9NXC5 875 aa18.47■□□□□ 0.55
UBE3C-201ENST00000348165 PGM3O95394 542 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 CLDN9O95484 217 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 ALOX12P18054 663 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 SMIM11AP58511 58 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 SH3RF2Q8TEC5 729 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 XAGE5Q8WWM1 108 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 PIGVQ9NUD9 493 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 GAD2Q05329 585 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 VPS26BQ4G0F5 336 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 TXNRD3NBQ6F5E7 133 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF540Q8NDQ6 660 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF671Q8TAW3 534 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 SPRTNQ9H040 489 aaPredicted RBP18.46■□□□□ 0.55
UBE3C-201ENST00000348165 NUAK2Q9H093 628 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 C3orf14Q9HBI5 128 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 ZNF180Q9UJW8 692 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 PER2O15055 1255 aa18.46■□□□□ 0.55
UBE3C-201ENST00000348165 PLEKHG4Q58EX7 1191 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms