RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CLK4Q9HAZ1 481 aaKnown RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 TNFRSF12AQ9NP84 129 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 SCUBE2Q9NQ36 999 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 PTPRSQ13332 1948 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 TCRBV3S1A0A5B6 114 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 OLFM2O95897 454 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 SLC12A2P55011 1212 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 PITRM1Q5JRX3 1037 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 CHSY3Q70JA7 882 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 BBS5Q8N3I7 341 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 FAM110BQ8TC76 370 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 MIPOL1Q8TD10 442 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 FEM1AQ9BSK4 669 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 CXXC1Q9P0U4 656 aaPredicted RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 GMPR2Q9P2T1 348 aaKnown RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 CNOT6Q9ULM6 557 aaKnown RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 FCF1Q9Y324 198 aaKnown RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 ZNF839A8K0R7 811 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 KIAA0355O15063 1070 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 ZSCAN9O15535 394 aaPredicted RBP21.14■□□□□ 0.98
PTPN18-202ENST00000347849 IMPDH2P12268 514 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 TIAL1Q01085 375 aaKnown RBP eCLIP21.14■□□□□ 0.98
PTPN18-202ENST00000347849 TRAP1Q12931 704 aaKnown RBP21.14■□□□□ 0.98
PTPN18-202ENST00000347849 Q6ZNB5 142 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 PIWIL4Q7Z3Z4 852 aaKnown RBP21.14■□□□□ 0.98
PTPN18-202ENST00000347849 LPCAT1Q8NF37 534 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 SLC39A3Q9BRY0 314 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 DUS2Q9NX74 493 aaKnown RBP21.14■□□□□ 0.98
PTPN18-202ENST00000347849 CD300AQ9UGN4 299 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 VWA7Q9Y334 891 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 OR51B4Q9Y5P0 310 aa21.14■□□□□ 0.98
PTPN18-202ENST00000347849 PDE4DIPQ5VU43 2346 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 GFRA2O00451 464 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 SOCS2O14508 198 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 CD3EAPO15446 510 aaKnown RBP21.14■□□□□ 0.97
PTPN18-202ENST00000347849 AKAP10O43572 662 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 CSKP41240 450 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 PPP3CCP48454 512 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 PRKCQQ04759 706 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 TRAF2Q12933 501 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 NHSL2Q5HYW2 709 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 FIBCD1Q8N539 461 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 CANT1Q8WVQ1 401 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 GFM2Q969S9 779 aaKnown RBP21.14■□□□□ 0.97
PTPN18-202ENST00000347849 PBXIP1Q96AQ6 731 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 EFHD1Q9BUP0 239 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 LRRC3Q9BY71 257 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 SLC8A2Q9UPR5 921 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 RAI2Q9Y5P3 530 aa21.14■□□□□ 0.97
PTPN18-202ENST00000347849 SNRPB2P08579 225 aaKnown RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 KCNC1P48547 511 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 POLD2P49005 469 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CDKN1CP49918 316 aaPredicted RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CLCN5P51795 746 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 SQLEQ14534 574 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 MAPRE2Q15555 327 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 ATXN7L2Q5T6C5 722 aaPredicted RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 TMC8Q8IU68 726 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CLVS1Q8IUQ0 354 aaPredicted RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 APCDD1Q8J025 514 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 OR4K2Q8NGD2 314 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 OR9I1Q8NGQ6 314 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 SLC22A17Q8WUG5 538 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CDKN2AIPNLQ96HQ2 116 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 MRPL57Q9BQC6 102 aaKnown RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 ANKRD60Q9BZ19 345 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 RETREG1Q9H6L5 497 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 EBF1Q9UH73 591 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CROCCQ5TZA2 2017 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 DOCK6Q96HP0 2047 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 PLXNA4Q9HCM2 1894 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 A0A1W2PRU2 124 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 MRASO14807 208 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 RPP40O75818 363 aaKnown RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CTSAP10619 480 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 ENTPD1P49961 510 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 PLK1P53350 603 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 TUBA4AP68366 448 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 PLOD1Q02809 727 aaPredicted RBP21.13■□□□□ 0.97
PTPN18-202ENST00000347849 C6orf10Q5SRN2 563 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 ALG14Q96F25 216 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 LHX3Q9UBR4 397 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 CROTQ9UKG9 612 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 SARDHQ9UL12 918 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
PTPN18-202ENST00000347849 GLP2RO95838 553 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 CKMP06732 381 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 ATP5F1P24539 256 aaPredicted RBP21.12■□□□□ 0.97
PTPN18-202ENST00000347849 GRIA3P42263 894 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 ZNF140P52738 457 aaPredicted RBP21.12■□□□□ 0.97
PTPN18-202ENST00000347849 GPR158Q5T848 1215 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 DHFR2Q86XF0 187 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 BBS7Q8IWZ6 715 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 TMEM199Q8N511 208 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 OR6K2Q8NGY2 324 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 FNDC8Q8TC99 324 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 UBXN10Q96LJ8 280 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 BIRC8Q96P09 236 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 VPS51Q9UID3 782 aa21.12■□□□□ 0.97
PTPN18-202ENST00000347849 ZNF510Q9Y2H8 683 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms