RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TTC1Q99614 292 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CPEB1Q9BZB8 566 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CEP44Q9C0F1 390 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MID1IP1Q9NPA3 183 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TRIM24O15164 1050 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 KRT36O76013 467 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 UGT2B4P06133 528 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SPAM1P38567 509 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CYLC2Q14093 348 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CHRNA6Q15825 494 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PPP1R3AQ16821 1122 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TRMT5Q32P41 509 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 UGT3A2Q3SY77 523 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PTRHD1Q6GMV3 140 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GRAMD4Q6IC98 578 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RIPOR1Q6ZS17 1223 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TPRG1Q6ZUI0 275 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 Q6ZVU0 165 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CHSY3Q70JA7 882 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RBFAQ8N0V3 343 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CBARPQ8N350 705 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CLDN19Q8N6F1 224 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 NAT16Q8N8M0 369 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TRPC4APQ8TEL6 797 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PANX3Q96QZ0 392 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CIPCQ9C0C6 399 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 DHRS7Q9Y394 339 aa13.99□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZNF106Q9H2Y7 1883 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TRBV5-4A0A0C4DH59 114 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 VGLL3A8MV65 326 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 AIM2O14862 343 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 KLK8O60259 260 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 FGF4P08620 206 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CEBPBP17676 345 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RPS3P23396 243 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ACRV1P26436 265 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CLCQ05315 142 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GEN1Q17RS7 908 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 C6orf163Q5TEZ5 329 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 LRRC66Q68CR7 880 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TMEM215Q68D42 235 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 USP45Q70EL2 814 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RBM23Q86U06 439 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZNF557Q8N988 423 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CHST14Q8NCH0 376 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GPR26Q8NDV2 337 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 STMN2Q93045 179 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ASIC4Q96FT7 647 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MTIF3Q9H2K0 278 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CRLS1Q9UJA2 301 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PPIL1Q9Y3C6 166 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 DNAJC15Q9Y5T4 150 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TRANK1O15050 2925 aa13.98□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ATP6AP2A0A1C7CYW4 349 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 UBDO15205 165 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ATP6AP2O75787 350 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PSMG1O95456 288 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RB1P06400 928 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GNAZP19086 355 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 NUDT2P50583 147 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 HK3P52790 923 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 FOXA1P55317 472 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ACTR3P61158 418 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 LCP2Q13094 533 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 DMC1Q14565 340 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RCN1Q15293 331 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GPR33Q49SQ1 333 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ANKS6Q68DC2 871 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GPSM1Q86YR5 675 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 OTUB2Q96DC9 234 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 C19orf60Q96EN9 201 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZNF641Q96N77 438 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MCCC1Q96RQ3 725 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SEMA4BQ9NPR2 832 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CDH22Q9UJ99 828 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GNPTGQ9UJJ9 305 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MRPS23Q9Y3D9 190 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PRSS21Q9Y6M0 314 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 C5orf42Q9H799 3197 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 A0A1B0GTL3 188 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 GRXCR1A8MXD5 290 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 STX16-NPEPL1H3BU86 382 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 STX16O14662 325 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZNF197O14709 1029 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 AZIN1O14977 448 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SNX2O60749 519 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RPS17P08708 135 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ITGB6P18564 788 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 LHCGRP22888 699 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 AGTR2P50052 363 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PTSQ03393 145 aa13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TBL3Q12788 808 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP1-202ENST00000346416 HERC3Q15034 1050 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms