RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CTPS1P17812 591 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 NNMTP40261 264 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 SLC26A3P40879 764 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 FOLH1Q04609 750 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 TBL3Q12788 808 aaKnown RBP12.74□□□□□ -0.37
CLK3-201ENST00000345005 SEMA3AQ14563 771 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 FAM83EQ2M2I3 478 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 EML3Q32P44 896 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 AGAP9Q5VTM2 703 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 LRRC8EQ6NSJ5 796 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 BORAQ6PGQ7 559 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 UGT2A3Q6UWM9 527 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 B3GNT6Q6ZMB0 384 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 SPATA24Q86W54 205 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 NPAS3Q8IXF0 933 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 DEFB107AQ8IZN7 70 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 NAT16Q8N8M0 369 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 BPIFB1Q8TDL5 484 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 MRPL38Q96DV4 380 aaKnown RBP12.74□□□□□ -0.37
CLK3-201ENST00000345005 CNDP1Q96KN2 507 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 LRGUKQ96M69 825 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 ZNF641Q96N77 438 aaPredicted RBP12.74□□□□□ -0.37
CLK3-201ENST00000345005 LRRC3BQ96PB8 259 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 OLFM1Q99784 485 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 TIMMDC1Q9NPL8 285 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 GDE1Q9NZC3 331 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 IL17CQ9P0M4 197 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 FKBPLQ9UIM3 349 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 CNOT11Q9UKZ1 510 aaKnown RBP12.74□□□□□ -0.37
CLK3-201ENST00000345005 ERVW-1Q9UQF0 538 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 CRYL1Q9Y2S2 319 aa12.74□□□□□ -0.37
CLK3-201ENST00000345005 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 G3V2L1 256 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 HOXC11O43248 304 aaPredicted RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 TRIM13O60858 407 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 CYP17A1P05093 508 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ITGAXP20702 1163 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 MC4RP32245 332 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 RANBP1P43487 201 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 TTPAP49638 278 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ZNF460Q14592 562 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 SFT2D3Q587I9 215 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 AARS2Q5JTZ9 985 aaKnown RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 FAM78AQ5JUQ0 283 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 KLC3Q6P597 504 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 EPGNQ6UW88 154 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ZYG11AQ6WRX3 759 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ZCCHC23Q6ZST2 131 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 GPR149Q86SP6 731 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 PQLC1Q8N2U9 271 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 WFIKKN2Q8TEU8 576 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 FGF13Q92913 245 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ASB16Q96NS5 453 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 GPR78Q96P69 363 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 GDF15Q99988 308 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 MRPL57Q9BQC6 102 aaKnown RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 IGFLR1Q9H665 355 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ZFYVE1Q9HBF4 777 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 POPDC3Q9HBV1 291 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 BPIFA1Q9NP55 256 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 OXSMQ9NWU1 459 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 OBP2AQ9NY56 170 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 ADAMTS6Q9UKP5 1117 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
CLK3-201ENST00000345005 TRIOBPQ9H2D6 2365 aa12.73□□□□□ -0.37
CLK3-201ENST00000345005 DOCK8Q8NF50 2099 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 RGSL1A5PLK6 1076 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 CLPTM1O96005 669 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 ASLP04424 464 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 ALPIP09923 528 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 LTA4HP09960 611 aaKnown RBP12.72□□□□□ -0.37
CLK3-201ENST00000345005 NCF2P19878 526 aaPredicted RBP12.72□□□□□ -0.37
CLK3-201ENST00000345005 FDXRP22570 491 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 GKP32189 559 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 HNF1BP35680 557 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 VIPR2P41587 438 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 DGKGP49619 791 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
CLK3-201ENST00000345005 PGGT1BP53609 377 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 HERC3Q15034 1050 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 CES4AQ5XG92 561 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 FSTL5Q8N475 847 aaPredicted RBP12.72□□□□□ -0.37
CLK3-201ENST00000345005 TMEM151AQ8N4L1 468 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 CCDC68Q9H2F9 335 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 MRPL46Q9H2W6 279 aaKnown RBP12.72□□□□□ -0.37
CLK3-201ENST00000345005 ZNF696Q9H7X3 374 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 ITGB1BP2Q9UKP3 347 aa12.72□□□□□ -0.37
CLK3-201ENST00000345005 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms