RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GRID2O43424 1007 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 PSTPIP1O43586 416 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 ZRANB2O95218 330 aaKnown RBP eCLIP12.28□□□□□ -0.44
SGCA-202ENST00000344627 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 NDST3O95803 873 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 GPR89BP0CG08 455 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 THRAP10827 490 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 ITGB6P18564 788 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 CYLC1P35663 651 aaPredicted RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 CDKN2BP42772 138 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 MAPK9P45984 424 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 NR2C2P49116 596 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 NAP1L1P55209 391 aaKnown RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 TBR1Q16650 682 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 ZFAND4Q86XD8 727 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 TC2NQ8N9U0 490 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 SLC37A2Q8TED4 501 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 P3H4Q92791 437 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 NKD1Q969G9 470 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 KIAA1143Q96AT1 154 aaPredicted RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 CCDC74BQ96LY2 380 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 OLFM3Q96PB7 478 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 HERPUD2Q9BSE4 406 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 OSGEPL1Q9H4B0 414 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 MAGEE1Q9HCI5 957 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 BPIFA1Q9NP55 256 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 FOXJ2Q9P0K8 574 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 KLHL8Q9P2G9 620 aaPredicted RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.28□□□□□ -0.44
SGCA-202ENST00000344627 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 PCYT1BQ9Y5K3 369 aaPredicted RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 KIR2DS5A0A0G2JLQ3 304 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 A0A0G2JNG1 304 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 A8MU76 341 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 KIR2DS3K7RE56 304 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 DNAJC6O75061 913 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 EML2O95834 649 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 FGF3P11487 239 aaPredicted RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 CCL4P13236 92 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 ZNF8P17098 575 aaPredicted RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 PTPN3P26045 913 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 HHEXQ03014 270 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 KIR2DS5Q14953 304 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 TCEAL1Q15170 157 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 TFDP3Q5H9I0 405 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 CYB5D1Q6P9G0 228 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 CRTC3Q6UUV7 619 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 CEACAM20Q6UY09 585 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 ZNF574Q6ZN55 896 aaPredicted RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 DAAM2Q86T65 1068 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 PHYKPLQ8IUZ5 450 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SFRP1Q8N474 314 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SLC25A41Q8N5S1 370 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 GPR26Q8NDV2 337 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 GDAP1Q8TB36 358 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 NCSTNQ92542 709 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SLC45A3Q96JT2 553 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 TEKT5Q96M29 485 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 TRIB3Q96RU7 358 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 ZSCAN5AQ9BUG6 496 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 HEMGNQ9BXL5 484 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SLC12A9Q9BXP2 914 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 CARD9Q9H257 536 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SARS2Q9NP81 518 aaKnown RBP12.27□□□□□ -0.45
SGCA-202ENST00000344627 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 SLC39A1Q9NY26 324 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 ATXN10Q9UBB4 475 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 TBC1D29Q9UFV1 150 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 FAM153AQ9UHL3 310 aa12.27□□□□□ -0.45
SGCA-202ENST00000344627 H7C0C1 242 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 MTSS1O43312 755 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 NUAK1O60285 661 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
SGCA-202ENST00000344627 NFKB1P19838 968 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A3P35503 534 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 CCR10P46092 362 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 ATP5OP48047 213 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 CLCNKAP51800 687 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 WNT3AP56704 352 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 ABHD18Q0P651 414 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 MAP7Q14244 749 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 PRKD1Q15139 912 aaPredicted RBP12.26□□□□□ -0.45
SGCA-202ENST00000344627 INSCQ1MX18 579 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 SARM1Q6SZW1 724 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 TMC3Q7Z5M5 1100 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 SLC9B2Q86UD5 537 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 CCDC170Q8IYT3 715 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 JPH3Q8WXH2 748 aaPredicted RBP12.26□□□□□ -0.45
SGCA-202ENST00000344627 GLYATL1Q969I3 302 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms