RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TBC1D30Q9Y2I9 924 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 NDUFAF1Q9Y375 327 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 YIPF1Q9Y548 306 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 OR6B1O95007 311 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 CHST9Q7L1S5 443 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 CRIPAKQ8N1N5 446 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 CDYL2Q8N8U2 506 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 WFDC5Q8TCV5 224 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF483Q8TF39 744 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 CANT1Q8WVQ1 401 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 AUTS2Q8WXX7 1259 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 CREBZFQ9NS37 354 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 SCN5AQ14524 2016 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 GIPC1O14908 333 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 TPST1O60507 370 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 SMIM18P0DKX4 95 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 HTRA3P83110 453 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 LYSMD3Q7Z3D4 306 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 IFNEQ86WN2 208 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 TMEM126BQ8IUX1 230 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 TTC30BQ8N4P2 665 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 PBXIP1Q96AQ6 731 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 ROPN1LQ96C74 230 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 SPATA16Q9BXB7 569 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 KLF16Q9BXK1 252 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 LHX3Q9UBR4 397 aa14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 AFF4Q9UHB7 1163 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-202ENST00000343765 GOLGA8CPA6NN73 597 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PRRG1O14668 218 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 KIF3CO14782 793 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 AKAP10O43572 662 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 AHCYL1O43865 530 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 OR4F21O95013 312 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 HSPA8P11142 646 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 NELFEP18615 380 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 GKP32189 559 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 RPL26P61254 145 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 ILF2Q12905 390 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 TRAP1Q12931 704 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 FUT11Q495W5 492 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 KLHDC10Q6PID8 442 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 NCEH1Q6PIU2 408 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 FAM151BQ6UXP7 276 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 HACD2Q6Y1H2 254 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 SPPL2CQ8IUH8 684 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 OR52B6Q8NGF0 335 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 DIS3LQ8TF46 1054 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 CAPNS2Q96L46 248 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PLEKHG4BQ96PX9 1271 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 SDR39U1Q9NRG7 319 aaPredicted RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PKP3Q9Y446 797 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 TCRBV3S1A0A5B6 114 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 C7orf72A4D263 438 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 BBIP1A8MTZ0 92 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 A8MX80 341 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PFDN6O15212 129 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 IDO1P14902 403 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF26P17031 533 aaPredicted RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 GSTT1P30711 240 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 SLC7A1P30825 629 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 CSKP41240 450 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 MYBPC1Q00872 1141 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 CAMK1DQ8IU85 385 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 OR2T11Q8NH01 316 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF461Q8TAF7 563 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 DNAJB14Q8TBM8 379 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 TOP1MTQ969P6 601 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 EID2BQ96D98 161 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 IGSF21Q96ID5 467 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 PRPF18Q99633 342 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 CWH43Q9H720 699 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 LZTS1Q9Y250 596 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 VPS9D1Q9Y2B5 631 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
VIPAS39-202ENST00000343765 ANKRD36A6QL64 1941 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 FXYD1O00168 92 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 ESRRBO95718 433 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 CYBBP04839 570 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 PIM1P11309 404 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 CKMT2P17540 419 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 UGT1A6P19224 532 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 UFM1P61960 85 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 CDH18Q13634 790 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 HMBOX1Q6NT76 420 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 FRA10AC1Q70Z53 315 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 SLC15A3Q8IY34 581 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 MYO1HQ8N1T3 1032 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 OR2T34Q8NGX1 318 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 OR2T3Q8NH03 318 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 OVCA2Q8WZ82 227 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 RPL10LQ96L21 214 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 SLC29A1Q99808 456 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 GPATCH1Q9BRR8 931 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 FEM1AQ9BSK4 669 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 TRIM4Q9C037 500 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 CMTM6Q9NX76 183 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 PLK2Q9NYY3 685 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 VPS51Q9UID3 782 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms