RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 CPNE5Q9HCH3 593 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 IL26Q9NPH9 171 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
USF2-202ENST00000343550 SUFUQ9UMX1 484 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 ARL5AQ9Y689 179 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 RP1P56715 2156 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 PMS2P1A4D2B8 440 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 NTN3O00634 580 aaPredicted RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 CES2O00748 559 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 C1QL1O75973 258 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 IVLP07476 585 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 RPL22P35268 128 aaKnown RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 FDFT1P37268 417 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 GNG11P61952 73 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 PTPRCAPQ14761 206 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 TAF1AQ15573 450 aaPredicted RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 FOXR1Q6PIV2 292 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 DOK6Q6PKX4 331 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 ARL14Q8N4G2 192 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 DTX3LQ8TDB6 740 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 ACTRT1Q8TDG2 376 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 CCDC74AQ96AQ1 378 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 CARS2Q9HA77 564 aaKnown RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 PAK5Q9P286 719 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 RABGEF1Q9UJ41 708 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 PKP3Q9Y446 797 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 OAS3Q9Y6K5 1087 aaKnown RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 MGAQ8IWI9 3026 aa17.84■□□□□ 0.45
USF2-202ENST00000343550 COL27A1Q8IZC6 1860 aaPredicted RBP17.84■□□□□ 0.45
USF2-202ENST00000343550 C2orf81A6NN90 581 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 CDRT15L2A8MXV6 281 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 ZNF185O15231 689 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 PPFIA2O75334 1257 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 LPOP22079 712 aaPredicted RBP17.83■□□□□ 0.45
USF2-202ENST00000343550 ARHGAP40Q5TG30 622 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 ZDHHC20Q5W0Z9 365 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 PDPK2PQ6A1A2 396 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 GSTA5Q7RTV2 222 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 CCL4L1Q8NHW4 92 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 CCDC97Q96F63 343 aaPredicted RBP17.83■□□□□ 0.45
USF2-202ENST00000343550 NAP1L3Q99457 506 aaPredicted RBP17.83■□□□□ 0.45
USF2-202ENST00000343550 AP1M1Q9BXS5 423 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 RAB6BQ9NRW1 208 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 KCND1Q9NSA2 647 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 TRNAU1APQ9NX07 287 aaKnown RBP17.83■□□□□ 0.45
USF2-202ENST00000343550 SMARCAL1Q9NZC9 954 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.83■□□□□ 0.45
USF2-202ENST00000343550 TMPRSS11EQ9UL52 423 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 SSUH2Q9Y2M2 353 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 KCTD3Q9Y597 815 aa17.83■□□□□ 0.45
USF2-202ENST00000343550 CCDC187A0A096LP49 1063 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 ERI2A8K979 691 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 STX7O15400 261 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 TNFSF15O95150 251 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 SLC25A14O95258 325 aaPredicted RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 ASMTLO95671 621 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 TPH1P17752 444 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 MLLT3P42568 568 aaPredicted RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 GNPDA1P46926 289 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 PCSK4Q6UW60 755 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 TAF8Q7Z7C8 310 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 LINC00523Q86TU6 105 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 OR6C4Q8NGE1 309 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 GPBAR1Q8TDU6 330 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 GLYATL1Q969I3 302 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 GFM1Q96RP9 751 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 TRIM39Q9HCM9 518 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 VPS18Q9P253 973 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 ST14Q9Y5Y6 855 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 KALRNO60229 2985 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 SCN8AQ9UQD0 1980 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 ERVH48-1M5A8F1 160 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 PGRMC1O00264 195 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 DNAJC6O75061 913 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 SUN1O94901 812 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 CRTAMO95727 393 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 SPAM1P38567 509 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 CCL7P80098 99 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 SEMA5AQ13591 1074 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 ATP13A5Q4VNC0 1218 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 PYCR3Q53H96 274 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 TTC27Q6P3X3 843 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 C4orf22Q6V702 233 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 MARK2Q7KZI7 788 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 B3GNT8Q7Z7M8 397 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 CLEC14AQ86T13 490 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 NRROSQ86YC3 692 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 OR4K2Q8NGD2 314 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 MAGOHBQ96A72 148 aaKnown RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 LIN37Q96GY3 246 aaPredicted RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 SUDS3Q9H7L9 328 aaPredicted RBP17.82■□□□□ 0.44
USF2-202ENST00000343550 ARFGAP3Q9NP61 516 aa17.82■□□□□ 0.44
USF2-202ENST00000343550 A0A1W2PQM1 296 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 E7EVH7 732 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 GAPDHSO14556 408 aaPredicted RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 LDB2O43679 373 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 RPLP0P05388 317 aaKnown RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 ITGA2BP08514 1039 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 TCP1P17987 556 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms