RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ALG2Q9H553 416 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 NARFLQ9H6Q4 476 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 NIPAL2Q9H841 368 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 APOBEC3GQ9HC16 384 aaKnown RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 ZC4H2Q9NQZ6 224 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF358Q9NW07 568 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 FAM118AQ9NWS6 357 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 CFL2Q9Y281 166 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 PCDHGB6Q9Y5F9 930 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 PCDHGB2Q9Y5G2 931 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 TAF1P21675 1872 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 PTPRJQ12913 1337 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 WTIPA6NIX2 430 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 UNCXA6NJT0 531 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 H0Y858 1186 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ENPP3O14638 875 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SLC9A3R1O14745 358 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 NRP1O14786 923 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MDM4O15151 490 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SPNP16150 400 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 RPL17P18621 184 aaKnown RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MGAT1P26572 445 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ACVR2AP27037 513 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 HOXA13P31271 388 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SOX6P35712 828 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SLC15A1P46059 708 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 LIG4P49917 911 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 JAK3P52333 1124 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 EMX1Q04741 257 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 IMPG1Q17R60 797 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 DPY19L1Q2PZI1 675 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PTPN20Q4JDL3 420 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 FAM98BQ52LJ0 330 aaKnown RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ZC3H12BQ5HYM0 836 aaKnown RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TOR2AQ5JU69 321 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SLC39A4Q6P5W5 647 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 LAYNQ6UX15 382 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TCTE3Q8IZS6 198 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PARP16Q8N5Y8 322 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PAF1Q8N7H5 531 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ST13P5Q8NFI4 369 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MFSD3Q96ES6 412 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 RNF170Q96K19 258 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 GPR22Q99680 433 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SLC30A3Q99726 388 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MRPL57Q9BQC6 102 aaKnown RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ADPGKQ9BRR6 497 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 C6orf62Q9GZU0 229 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TOR3AQ9H497 397 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ZFP14Q9HCL3 533 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 OPTCQ9UBM4 332 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 JAG2Q9Y219 1238 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TRAPPC4Q9Y296 219 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TLR6Q9Y2C9 796 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 KAT6AQ92794 2004 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PRR23AA6NEV1 266 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CTDSP2O14595 271 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MATN4O95460 622 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PSAPP07602 524 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 RAP2AP10114 183 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 IL1R1P14778 569 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 JUNDP17535 347 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ATP5F1P24539 256 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PSMB9P28065 219 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 HTR1EP28566 365 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SHMT1P34896 483 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 IRF9Q00978 393 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CLCA4Q14CN2 919 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ANGPT1Q15389 498 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CA9Q16790 459 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 KIF19Q2TAC6 998 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 GPAT3Q53EU6 434 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ARMCX4Q5H9R4 360 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 OTUD3Q5T2D3 398 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF691Q5VV52 312 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 XYLT1Q86Y38 959 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CLEC10AQ8IUN9 316 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SYTL1Q8IYJ3 562 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MIER2Q8N344 545 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PQLC3Q8N755 202 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CELF2-AS1Q8N7Q2 184 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 CCNYL1Q8N7R7 359 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 APPL2Q8NEU8 664 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 OR10T2Q8NGX3 314 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 HMGCLL1Q8TB92 370 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 MCOLN3Q8TDD5 553 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 IPCEF1Q8WWN9 437 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-201ENST00000343524 ARNTL2Q8WYA1 636 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 VPS39Q96JC1 886 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TTYH2Q9BSA4 534 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 C1QTNF7Q9BXJ2 289 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PLEKHA5Q9HAU0 1116 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TIGARQ9NQ88 270 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 PRDM8Q9NQV8 689 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms