RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 EBF2Q9HAK2 575 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 EMCNQ9ULC0 261 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 PRKAB1Q9Y478 270 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TM7SF2O76062 418 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 STMN1P16949 149 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 MAGEA12P43365 314 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 RAB10P61026 200 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 DMWDQ09019 674 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 ZNF284Q2VY69 593 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 SHDQ96IW2 340 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 IKZF3Q9UKT9 509 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 MRPS17Q9Y2R5 130 aaKnown RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 EML5Q05BV3 1969 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 TMEM202A6NGA9 273 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 COPEO14579 308 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 RHOBTB1O94844 696 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 TRIM16O95361 564 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CCNFP41002 786 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 GPR1P46091 355 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CLCN5P51795 746 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CTSCP53634 463 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CLDN2P57739 230 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 ZXDAP98168 799 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 LRRC32Q14392 662 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 IRF4Q15306 451 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 ZKSCAN8Q15776 578 aaPredicted RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 TIFABQ6ZNK6 161 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 NXNL1Q96CM4 212 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 C6orf106Q9H6K1 298 aaPredicted RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 INTS10Q9NVR2 710 aaKnown RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 SIT1Q9Y3P8 196 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 SLC25A14O95258 325 aaPredicted RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 FDXRP22570 491 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CNTFP26441 200 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 DGKEP52429 567 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 DCDC1P59894 354 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CSHL1Q14406 222 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 INPP5AQ14642 412 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 TCEA2Q15560 299 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CWF19L1Q69YN2 538 aaKnown RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 PAQR3Q6TCH7 311 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 TRAM1L1Q8N609 369 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 COPS8Q99627 209 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 GPAMQ9HCL2 828 aa13.74□□□□□ -0.21
PMS1-201ENST00000342075 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
PMS1-201ENST00000342075 TSPAN6O43657 245 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 CHRM3P20309 590 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 NFKBIAP25963 317 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 POLD2P49005 469 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 N4BP2L1Q5TBK1 243 aaPredicted RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 MTERF4Q7Z6M4 381 aaKnown RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 TAX1BP1Q86VP1 789 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 LMNTD2Q8IXW0 634 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 LILRA3Q8N6C8 439 aaPredicted RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 ARMC2Q8NEN0 867 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 ISL2Q96A47 359 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 ADAM21Q9UKJ8 722 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 CHURC1-FNTBB4DL54 471 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 H3BMM5 538 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 TK2O00142 265 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 PSMD11O00231 422 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 AP1G1O43747 822 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 SGTAO43765 313 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 PTGER3P43115 390 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 SLC12A2P55011 1212 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 ITGA9Q13797 1035 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 HEATR4Q86WZ0 1026 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 RASGEF1AQ8N9B8 481 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 DENND1AQ8TEH3 1009 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 BTN2A2Q8WVV5 523 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
PMS1-201ENST00000342075 CLPBQ9H078 707 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 ZDHHC3Q9NYG2 299 aa13.73□□□□□ -0.21
PMS1-201ENST00000342075 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 POU4F1Q01851 419 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 23.8
PMS1-201ENST00000342075 PLA2G4EQ3MJ16 856 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 GPR33Q49SQ1 333 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 PTRHD1Q6GMV3 140 aaKnown RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 GALNT7Q86SF2 657 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CPNE9Q8IYJ1 553 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CD200R1Q8TD46 325 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms