RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 POLEQ07864 2286 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 DPM1O60762 260 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 MT-ND3P03897 115 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 XRCC1P18887 633 aaPredicted RBP16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 PPP6R3Q5H9R7 873 aaPredicted RBP16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 SYVN1Q86TM6 617 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 ADAMTS17Q8TE56 1095 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 PNPLA2Q96AD5 504 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 GPR87Q9BY21 358 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 ETNK2Q9NVF9 386 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 CWC15Q9P013 229 aaKnown RBP16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 SLC23A2Q9UGH3 650 aa16.12■□□□□ 0.17
NECTIN1-202ENST00000340882 IGHV5-51A0A0C4DH38 117 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 A0A0J9YYE9 177 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 ARHGAP10A1A4S6 786 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 A6NL46 340 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 OR5K4A6NMS3 321 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 ZNF185O15231 689 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 GRID2O43424 1007 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 MAFKO60675 156 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 LRCH4O75427 683 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 CLDN7O95471 211 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 TRBC1P01850 177 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 SLC2A4P14672 509 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 NELFEP18615 380 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 POLR2FP61218 127 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 DPYSQ14117 519 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 CAMK4Q16566 473 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 TPD52L1Q16890 204 aaPredicted RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 PLEKHN1Q494U1 663 aaPredicted RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 ERMARDQ5T6L9 678 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 LCN10Q6JVE6 187 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 CISD2Q8N5K1 135 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 TTC13Q8NBP0 860 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 MARVELD3Q96A59 401 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 UNKQ9C0B0 810 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 OSGEPL1Q9H4B0 414 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 KLC4Q9NSK0 619 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 DTLQ9NZJ0 730 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 ATXN10Q9UBB4 475 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 FARSAQ9Y285 508 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 ADGRG1Q9Y653 693 aa16.11■□□□□ 0.17
NECTIN1-202ENST00000340882 HIVEP1P15822 2718 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 NUAK1O60285 661 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 PYGLP06737 847 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 ZNF8P17098 575 aaPredicted RBP16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 HSPA9P38646 679 aaKnown RBP16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 CAPZBP47756 277 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 TUBB3Q13509 450 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 ZRANB3Q5FWF4 1079 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 IRGCQ6NXR0 463 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 SAMSN1Q9NSI8 373 aaKnown RBP16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 PCDHGB7Q9Y5F8 929 aa16.1■□□□□ 0.17
NECTIN1-202ENST00000340882 ZGRF1Q86YA3 2104 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 ANKUB1A6NFN9 424 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 VIPP01282 170 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 EBLN1P0CF75 366 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 BRAFP15056 766 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 ZNF30P17039 623 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 CLCNKAP51800 687 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 ITGA1P56199 1179 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 RPS15P62841 145 aaKnown RBP16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 GPS2Q13227 327 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 RAPSNQ13702 412 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 PLA2G4EQ3MJ16 856 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 HENMT1Q5T8I9 393 aaKnown RBP16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 DCUN1D2Q6PH85 259 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 PHYKPLQ8IUZ5 450 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 RHOT1Q8IXI2 618 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 SLC38A9Q8NBW4 561 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 SEC14L1Q92503 715 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 TRIM7Q9C029 511 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 RMI1Q9H9A7 625 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 PDE7BQ9NP56 450 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 NT5MQ9NPB1 228 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 RARRES3Q9UL19 164 aa16.09■□□□□ 0.17
NECTIN1-202ENST00000340882 OR52A4PA6NMU1 304 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 TMEM63AO94886 807 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 PRLP01236 227 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 AMPD1P23109 780 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 PSMA2P25787 234 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 MMP13P45452 471 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 GPR18Q14330 331 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 ZNF517Q6ZMY9 492 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 TRIM48Q8IWZ4 208 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 SLC34A3Q8N130 599 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 SLC41A2Q96JW4 573 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 OR2AG1Q9H205 316 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 CARD9Q9H257 536 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 CHST8Q9H2A9 424 aa16.08■□□□□ 0.16
NECTIN1-202ENST00000340882 SEPT11Q9NVA2 429 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms