RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF148Q9UQR1 794 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 ZKSCAN5Q9Y2L8 839 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 PRKAB1Q9Y478 270 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 JRKLQ9Y4A0 524 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 KCTD3Q9Y597 815 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 B4DGG1 531 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 GPR39O43194 453 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 CEP104O60308 925 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 PPFIA2O75334 1257 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 TCEA3O75764 348 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 SLC25A14O95258 325 aaPredicted RBP15.22■□□□□ 0.03
VAPA-201ENST00000340541 AP2A1O95782 977 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 ETS1P14921 441 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 ZNF8P17098 575 aaPredicted RBP15.22■□□□□ 0.03
VAPA-201ENST00000340541 LPOP22079 712 aaPredicted RBP15.22■□□□□ 0.03
VAPA-201ENST00000340541 SPAM1P38567 509 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 GABREP78334 506 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 CCDC173Q0VFZ6 552 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 LRP8Q14114 963 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
VAPA-201ENST00000340541 CHRNA6Q15825 494 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 ISXQ2M1V0 245 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 C14orf28Q4W4Y0 310 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 SLC30A9Q6PML9 568 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 CCDC74AQ96AQ1 378 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 CCDC3Q9BQI4 270 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 OR2AG1Q9H205 316 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 LRRC40Q9H9A6 602 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 THSD1Q9NS62 852 aa15.22■□□□□ 0.03
VAPA-201ENST00000340541 FEZ2Q9UHY8 353 aaPredicted RBP15.22■□□□□ 0.03
VAPA-201ENST00000340541 GLYATL1P3A0A0U1RQE8 302 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 USP27XA6NNY8 438 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 CHUKO15111 745 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 STX7O15400 261 aaKnown RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 ZSCAN12O43309 604 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 LDB2O43679 373 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A9O60656 530 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 MTX2O75431 263 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 IFNB1P01574 187 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 MPOP05164 745 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A6P19224 532 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A1P22309 533 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A4P22310 534 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A3P35503 534 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A5P35504 534 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 ACTR1BP42025 376 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 MLLT3P42568 568 aaPredicted RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 ZNF140P52738 457 aaPredicted RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 ACTR1AP61163 376 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 FAM151BQ6UXP7 276 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 PHYKPLQ8IUZ5 450 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 NAGSQ8N159 534 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 SLC35F6Q8N357 371 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 RASGEF1CQ8N431 466 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 PRELID2Q8N945 189 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 OR4K2Q8NGD2 314 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 PATE1Q8WXA2 126 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 CCDC97Q96F63 343 aaPredicted RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A7Q9HAW7 530 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A10Q9HAW8 530 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 UGT1A8Q9HAW9 530 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 ETNK1Q9HBU6 452 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
VAPA-201ENST00000340541 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
VAPA-201ENST00000340541 KALRNO60229 2985 aa15.21■□□□□ 0.02
VAPA-201ENST00000340541 PRR19A6NJB7 356 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 GPR89AB7ZAQ6 455 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 ERVH48-1M5A8F1 160 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 NTN3O00634 580 aaPredicted RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 PSMD3O43242 534 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 GRID2O43424 1007 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 EML2O95834 649 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 ZSCAN5DPP0CG00 497 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 GPR89BP0CG08 455 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 GLB1P16278 677 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 RPL22P35268 128 aaKnown RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 MAZP56270 477 aaKnown RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 XIAPP98170 497 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 RHDQ02161 417 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 LONRF2Q1L5Z9 754 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 RBM44Q6ZP01 1051 aaKnown RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 CHST15Q7LFX5 561 aaPredicted RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 ZNF547Q8IVP9 402 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 OR6C4Q8NGE1 309 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 OR13C4Q8NGS5 318 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 SNRNP27Q8WVK2 155 aaKnown RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 ANP32BQ92688 251 aaKnown RBP15.2■□□□□ 0.02
VAPA-201ENST00000340541 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms