RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 RRAGCQ9HB90 399 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ARMC1Q9NVT9 282 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SARDHQ9UL12 918 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 MOXD2PA6NHM9 499 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 AQP12BA6NM10 295 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 TOR1BO14657 336 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 TPP2P29144 1249 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-201ENST00000340437 CAPGP40121 348 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 SELPLGQ14242 412 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 GLT6D1Q7Z4J2 308 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 AQP12AQ8IXF9 295 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 FAM126BQ8IXS8 530 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 KIAA2013Q8IYS2 634 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 LGI2Q8N0V4 545 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 FNDC8Q8TC99 324 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 TMEM125Q96AQ2 219 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 CDKN2AIPNLQ96HQ2 116 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 MYRFLQ96LU7 910 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 POLR1EQ9GZS1 481 aaKnown RBP14.28□□□□□ -0.12
CPSF7-201ENST00000340437 MRM3Q9HC36 420 aaKnown RBP14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ZFP14Q9HCL3 533 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-201ENST00000340437 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 BMP10O95393 424 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 CCT8P50990 548 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ADAM17P78536 824 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 FAM171BQ6P995 826 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 LYSMD3Q7Z3D4 306 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ITIH5Q86UX2 942 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 EEF1AKMT1Q8WVE0 214 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 L3HYPDHQ96EM0 354 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 MARCH2Q9P0N8 246 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 BBIP1A8MTZ0 92 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 E2F6O75461 281 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 RPP40O75818 363 aaKnown RBP14.28□□□□□ -0.12
CPSF7-201ENST00000340437 SERPINF2P08697 491 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 FDXRP22570 491 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 HMOX2P30519 316 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 HTR6P50406 440 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 CREB5Q02930 508 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 BNIP2Q12982 314 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 USP41Q3LFD5 358 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 SLC36A3Q495N2 470 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 FRA10AC1Q70Z53 315 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF554Q86TJ5 538 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 ABI1Q8IZP0 508 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 OR2T11Q8NH01 316 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 PFDN4Q9NQP4 134 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 AASSQ9UDR5 926 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 LIMD1Q9UGP4 676 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 SPO11Q9Y5K1 396 aa14.28□□□□□ -0.12
CPSF7-201ENST00000340437 A0A1W2PP18 115 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 CBX4O00257 560 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 PEX11BO96011 259 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.12
CPSF7-201ENST00000340437 MYF6P23409 242 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 POLR2IP36954 125 aaKnown RBP14.27□□□□□ -0.12
CPSF7-201ENST00000340437 KCNQ1P51787 676 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 PRMT9Q6P2P2 845 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 GALNT18Q6P9A2 607 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ITFG1Q8TB96 612 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ARRDC2Q8TBH0 407 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 LINGO1Q96FE5 620 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ITCHQ96J02 903 aa14.27□□□□□ -0.12
CPSF7-201ENST00000340437 GPATCH1Q9BRR8 931 aaKnown RBP14.27□□□□□ -0.12
CPSF7-201ENST00000340437 POLR3HQ9Y535 204 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-201ENST00000340437 ALDH4A1P30038 563 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 TUBA4AP68366 448 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 LAPTM4AQ15012 233 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 ATP6AP1Q15904 470 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 TAF12Q16514 161 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 SLC44A4Q53GD3 710 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 DDHD1Q8NEL9 900 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 ZUFSPQ96AP4 578 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 HIPK3Q9H422 1215 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 SDR39U1Q9NRG7 319 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 OAS3Q9Y6K5 1087 aaKnown RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 IRF1P10914 325 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 SLC2A4P14672 509 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 MATN1P21941 496 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 IL12AP29459 219 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 RFC2P35250 354 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 PURAQ00577 322 aaKnown RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 MANEALQ5VSG8 457 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 LINGO4Q6UY18 593 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 GPSM1Q86YR5 675 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 SNX29P2Q8IUI4 249 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 MINDY1Q8N5J2 469 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 TMBIM1Q969X1 311 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.27□□□□□ -0.134e-6■■■■■ 41.2
CPSF7-201ENST00000340437 FEM1CQ96JP0 617 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 ATOH8Q96SQ7 321 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms