RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FRMD8P1Q9BZ68 369 aaPredicted RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZCCHC2Q9C0B9 1178 aaKnown RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ASCL3Q9NQ33 180 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 BPTFQ12830 3046 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 NBEAQ8NFP9 2946 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 KIR2DS5A0A0G2JLQ3 304 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 A0A0G2JNG1 304 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 KIR2DS3K7RE56 304 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 PLD2O14939 933 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 KMOO15229 486 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 DDX3YO15523 660 aaKnown RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 NRDCO43847 1150 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 FTCDO95954 541 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZFP36L1Q07352 338 aaKnown RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 KLF1Q13351 362 aaPredicted RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 ITGA9Q13797 1035 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 KIR2DS5Q14953 304 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 RANBP10Q6VN20 620 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 RAB11FIP2Q7L804 512 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 ADGRG6Q86SQ4 1221 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 CLEC14AQ86T13 490 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 PIM3Q86V86 326 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 TTC30BQ8N4P2 665 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 TIMM29Q9BSF4 260 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 DPH1Q9BZG8 443 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 OR2AG1Q9H205 316 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 SARS2Q9NP81 518 aaKnown RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
SIRPB3P-201ENST00000340424 CDRT15L2A8MXV6 281 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 AURKAO14965 403 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 RRP9O43818 475 aaKnown RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 KCNJ13O60928 360 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ACP5P13686 325 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 F3P13726 295 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZNF8P17098 575 aaPredicted RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 VCLP18206 1134 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 PSMB4P28070 264 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ALDH4A1P30038 563 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ADRA1AP35348 466 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 CHRNA4P43681 627 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 UCNP55089 124 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 GTF2H3Q13889 308 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 TAF1AQ15573 450 aaPredicted RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 P3H1Q32P28 736 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 LDLRAP1Q5SW96 308 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 FAM182AQ5T1J6 154 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 B3GNT8Q7Z7M8 397 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 LRRTM4Q86VH4 590 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 SFTPA2Q8IWL1 248 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 KLHDC8BQ8IXV7 354 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 PRR11Q96HE9 360 aaPredicted RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ALS2CR12Q96Q35 445 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 CMKLR1Q99788 373 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 B3GNT4Q9C0J1 378 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 EPB41L5Q9HCM4 733 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 BPIFA1Q9NP55 256 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 IL26Q9NPH9 171 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 SMOXQ9NWM0 555 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 PLEKHM1Q9Y4G2 1056 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 PCDHGA7Q9Y5G6 932 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
SIRPB3P-201ENST00000340424 GLYATL1P3A0A0U1RQE8 302 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 A6NCN8 305 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 HGSO14964 777 aaPredicted RBP13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 GPR37O15354 613 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 STX7O15400 261 aaKnown RBP13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 B4GAT1O43505 415 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 CDK14O94921 469 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 TNFSF15O95150 251 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 CRTAMO95727 393 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 AGTP01019 485 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 CCDC175P0C221 793 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 JMJD7P0C870 316 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 LPOP22079 712 aaPredicted RBP13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 EPHA4P54764 986 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 OR1D5P58170 312 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms