RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 VPS4BO75351 444 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 LRIG2O94898 1065 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 MLYCDO95822 493 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 NR2F6P10588 404 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 ZNF182P17025 639 aaPredicted RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 SLC6A2P23975 617 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 LMO2P25791 158 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 RYKP34925 604 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 MAN2A2P49641 1150 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 SLC26A2P50443 739 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 SDE2Q6IQ49 451 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 PYCR2Q96C36 320 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 PPP3R2Q96LZ3 170 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 FBRSL1Q9HCM7 1045 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 EIF2B4Q9UI10 523 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 PDE10AQ9Y233 779 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 TNPO3Q9Y5L0 923 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 MAGEB3O15480 346 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 CATP04040 527 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 PTNP21246 168 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 WARSP23381 471 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 CEBPGP53567 150 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 SFSWAPQ12872 951 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
RTN3-202ENST00000339997 TMEM192Q8IY95 271 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 DNERQ8NFT8 737 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 FBXL20Q96IG2 436 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 HSFY1Q96LI6 401 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 BEX2Q9BXY8 128 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 GLOD4Q9HC38 313 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 TIMMDC1Q9NPL8 285 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 ARHGEF4Q9NR80 690 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 ABCC13Q9NSE7 274 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 PTTG2Q9NZH5 202 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 MBD2Q9UBB5 411 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 RPS6KA6Q9UK32 745 aa8.64□□□□□ -1.03
RTN3-202ENST00000339997 ARID1AO14497 2285 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 GPR25O00155 361 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 PDHXO00330 501 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 DHX15O43143 795 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 DYRK3O43781 588 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 STX11O75558 287 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 OR6A2O95222 327 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 C4BPAP04003 597 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 PRKCGP05129 697 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ATP5BP06576 529 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 S100A9P06702 114 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 HPCAL1P37235 193 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 STARP49675 285 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ANXA11P50995 505 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 RAB27AP51159 221 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 DGKQP52824 942 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 CDH12P55289 794 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 CD83Q01151 205 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 HMGCS1Q01581 520 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 BIKQ13323 160 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 TARBP2Q15633 366 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 INSCQ1MX18 579 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 FAM174BQ3ZCQ3 159 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 MOSPD2Q8NHP6 518 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SUN5Q8TC36 379 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 S100ZQ8WXG8 99 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 USP7Q93009 1102 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 TMEM74Q96NL1 305 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 UNC93B1Q9H1C4 597 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 BEX1Q9HBH7 125 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 AHSPQ9NZD4 102 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SNX6Q9UNH7 406 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 KCNH4Q9UQ05 1017 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 TNFSF13BQ9Y275 285 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ITSN1Q15811 1721 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 A0A1B0GVG6 124 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 MATN2O00339 956 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 PGRMC2O15173 223 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 GABBR2O75899 941 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SLC25A14O95258 325 aaPredicted RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 OTCP00480 354 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 OPN1SWP03999 348 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 MFSD10Q14728 455 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SMARCD3Q6STE5 483 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 TREML1Q86YW5 311 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 CPNE9Q8IYJ1 553 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ASB2Q96Q27 587 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 IL4I1Q96RQ9 567 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 WDR12Q9GZL7 423 aaKnown RBP8.63□□□□□ -1.03
RTN3-202ENST00000339997 CD84Q9UIB8 345 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 RAB26Q9ULW5 256 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 ING4Q9UNL4 249 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 SLC15A5A6NIM6 579 aa8.63□□□□□ -1.03
RTN3-202ENST00000339997 OR2AG2A6NM03 316 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms