RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PIGGQ5H8A4 983 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 DRAXINQ8NBI3 349 aaPredicted RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 GPR156Q8NFN8 814 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 MED8Q96G25 268 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 TCF12Q99081 682 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 GPR62Q9BZJ7 368 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SYTL2Q9HCH5 934 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 RSL24D1Q9UHA3 163 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 MOSPD1Q9UJG1 213 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 H3BNX3 289 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 TBL1XO60907 577 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 KRT75O95678 551 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 ZNF37AP17032 561 aaPredicted RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 HTR6P50406 440 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 NR1H2P55055 460 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 CRHR2Q13324 411 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 GRB14Q14449 540 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ZNF621Q6ZSS3 439 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 LMNTD1Q8N9Z9 388 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ADCY4Q8NFM4 1077 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 RDH11Q8TC12 318 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 EBPLQ9BY08 206 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 DAPK2Q9UIK4 370 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ZNF195O14628 629 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 LSM1O15116 133 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 SLC22A3O75751 556 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 RSL1D1O76021 490 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 ELK4P28324 431 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 RGRP47804 291 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 SMAD3P84022 425 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 GLMNQ92990 594 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 FAR2Q96K12 515 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 CIPCQ9C0C6 399 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 NSUN3Q9H649 340 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 EBF1Q9UH73 591 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 TRIP12Q14669 1992 aaPredicted RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 M0R3G1 203 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 UBFD1O14562 309 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 SCAMP1O15126 338 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 MUSKO15146 869 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 TFAP2AP05549 437 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 TACR2P21452 398 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ARNTP27540 789 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ATP5C1P36542 298 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 TECRLQ5HYJ1 363 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 FAM45BPQ6NSW5 357 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 PSAPL1Q6NUJ1 521 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 FAM45AQ8TCE6 357 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 ADI1Q9BV57 179 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 CHID1Q9BWS9 393 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 SMG9Q9H0W8 520 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 FBXO44Q9H4M3 255 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 NOL6Q9H6R4 1146 aaKnown RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 RIC8BQ9NVN3 520 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 POLR3BQ9NW08 1133 aaPredicted RBP11.85□□□□□ -0.51
USP1-201ENST00000339950 GIT1Q9Y2X7 761 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 SPO11Q9Y5K1 396 aa11.85□□□□□ -0.51
USP1-201ENST00000339950 BCAS2O75934 225 aaPredicted RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 CHRM5P08912 532 aaPredicted RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 SBK3P0C264 359 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 CORO1AP31146 461 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 GSK3BP49841 420 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 HNRNPDQ14103 355 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 KIAA0930Q6ICG6 404 aaPredicted RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 PGM2L1Q6PCE3 622 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 CPSF7Q8N684 471 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 KCTD13Q8WZ19 329 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 FAM120BQ96EK7 910 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 MYEOVQ96EZ4 313 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
USP1-201ENST00000339950 ARL15Q9NXU5 204 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 INVSQ9Y283 1065 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 BOLA2-SMG1P6H3BVE0 249 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 NME4O00746 187 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 ARPC2O15144 300 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 NDST2P52849 883 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 PRKAA2P54646 552 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 FAM174BQ3ZCQ3 159 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 ISCA2Q86U28 154 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 SNX29P2Q8IUI4 249 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 BTBD9Q96Q07 612 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 IPPKQ9H8X2 491 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 MKS1Q9NXB0 559 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 SH3BP4Q9P0V3 963 aa11.84□□□□□ -0.51
USP1-201ENST00000339950 SEPT3Q9UH03 358 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms