RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 EYSQ5T1H1 3165 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 ANTXRLA6NF34 631 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 PPP6CO00743 305 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 ECI2O75521 394 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 ATP13A5Q4VNC0 1218 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 FAM91A1Q658Y4 838 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 CUZD1Q86UP6 607 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 RBFAQ8N0V3 343 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 CBARPQ8N350 705 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 FBXO27Q8NI29 283 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 TCF7L2Q9NQB0 619 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 IL36AQ9UHA7 158 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 SLC8A2Q9UPR5 921 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 TRBV5-4A0A0C4DH59 114 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 KERAO60938 352 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 TRIM16O95361 564 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 NFATC1O95644 943 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 HLA-EP13747 358 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 FCARP24071 287 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 POLR2LP62875 67 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 HERVK_113P63132 956 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 FUBP1Q96AE4 644 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 FAM83CQ9BQN1 747 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 ERVK-6Q9BXR3 956 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 ZDHHC4Q9NPG8 344 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 PLA2G4CQ9UP65 541 aa22.22■■□□□ 1.15
PDLIM2-203ENST00000339162 SKAP2O75563 359 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 ATP6V0D1P61421 351 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 LSM12Q3MHD2 195 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 SYCE2Q6PIF2 218 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 LONP2Q86WA8 852 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PLPP6Q8IY26 295 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 NXPE1Q8N323 547 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PHTF2Q8N3S3 785 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 L3HYPDHQ96EM0 354 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 NSUN5Q96P11 429 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 HPS4Q9NQG7 708 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 SPTBN5Q9NRC6 3674 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 KLC4Q9NSK0 619 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PCDHB1Q9Y5F3 818 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 DCXO43602 365 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PAPLNO95428 1278 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PPARGP37231 505 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 ST8SIA6P61647 398 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 NFKB2Q00653 900 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 HYAL1Q12794 435 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 GRM2Q14416 872 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 BRAT1Q6PJG6 821 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 POU5F2Q8N7G0 328 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 TTC1Q99614 292 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 TUBB6Q9BUF5 446 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 PCDH12Q9NPG4 1184 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 UTP6Q9NYH9 597 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 DEC1Q9P2X7 70 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 SLC27A6Q9Y2P4 619 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 COMMD10Q9Y6G5 202 aa22.21■■□□□ 1.15
PDLIM2-203ENST00000339162 SLC25A14O95258 325 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 TIMP2P16035 220 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 SPINT3P49223 89 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 METAP1P53582 386 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 ARHGEF7Q14155 803 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 NXNQ6DKJ4 435 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 CLEC6AQ6EIG7 209 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 VITQ6UXI7 678 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 SCAMP4Q969E2 229 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 MRPL38Q96DV4 380 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 DZANK1Q9NVP4 752 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 TAS2R1Q9NYW7 299 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 GDE1Q9NZC3 331 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 DHRS7Q9Y394 339 aa22.2■■□□□ 1.14
PDLIM2-203ENST00000339162 CCDC189A1A4V9 331 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 SRPRAP08240 638 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 CD9P21926 228 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 SERPINB5P36952 375 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 GPR33Q49SQ1 333 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 TMEM198Q66K66 360 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 HSD11B1LQ7Z5J1 315 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 WFIKKN2Q8TEU8 576 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 ESAMQ96AP7 390 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 BTBD10Q9BSF8 475 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 PLA2G2FQ9BZM2 168 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 EML4Q9HC35 981 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 VTI1BQ9UEU0 232 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 GNPTGQ9UJJ9 305 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 SARDHQ9UL12 918 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 ANKRD12Q6UB98 2062 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 B2RBV5 119 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 GYG2O15488 501 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 CD1EP15812 388 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 RAB30Q15771 203 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 TTC31Q49AM3 519 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 UGT3A1Q6NUS8 523 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 FBXO39Q8N4B4 442 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 CDCA3Q99618 268 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 CADM1Q9BY67 442 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 ZFP14Q9HCL3 533 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 TAGLN3Q9UI15 199 aa22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-203ENST00000339162 ASLP04424 464 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 RPS3P23396 243 aaKnown RBP eCLIP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms