RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 COA4Q9NYJ1 87 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ERVK-18Q9QC07 812 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 FAM198AQ9UFP1 575 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TMPRSS11EQ9UL52 423 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 MAP3K2Q9Y2U5 619 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 HEMK1Q9Y5R4 338 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CASZ1Q86V15 1759 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 MEIOCA2RUB1 952 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RTCAO00442 366 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SOAT2O75908 522 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CNTN5O94779 1100 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 GUCA1CO95843 209 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 LALBAP00709 142 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 IFNA2P01563 188 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 FCER2P06734 321 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 HBQ1P09105 142 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 WEE2P0C1S8 567 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ANXA8P13928 327 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SOX9P48436 509 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CLCNKAP51800 687 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RACK1P63244 317 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 FOXM1Q08050 763 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 DDX39BQ13838 428 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 UBAP2LQ14157 1087 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PPA1Q15181 289 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 NRF1Q16656 503 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 GTDC1Q4AE62 458 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 DALRD3Q5D0E6 543 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 THEM4Q5T1C6 240 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ANXA8L1Q5VT79 327 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PM20D1Q6GTS8 502 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 DENND5BQ6ZUT9 1274 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ZER1Q7Z7L7 766 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SYVN1Q86TM6 617 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PROSER2Q86WR7 435 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ZDHHC13Q8IUH4 622 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 DSELQ8IZU8 1212 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 GHDCQ8N2G8 530 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF431Q8TF32 576 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TCEAL4Q96EI5 215 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PGAP3Q96FM1 320 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 HSFY1Q96LI6 401 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 FAM49AQ9H0Q0 323 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 GHITMQ9H3K2 345 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 MINDY3Q9H8M7 445 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PRMT8Q9NR22 394 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM181Q9P2C4 612 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 EPHA6Q9UF33 1036 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SEPT9Q9UHD8 586 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 NARFQ9UHQ1 456 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PCOLCE2Q9UKZ9 415 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CDH9Q9ULB4 789 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PLEKHA6Q9Y2H5 1048 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 MAGED1Q9Y5V3 778 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PI4KAP2A4QPH2 592 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ITGA10O75578 1167 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 KCNK2O95069 426 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RAB3DO95716 219 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RRASP10301 218 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 EPHA3P29320 983 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CTHP32929 405 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CRHR1P34998 444 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RPS19P39019 145 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 BTN1A1Q13410 526 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 OCLNQ16625 522 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 STEAP3Q658P3 488 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TRIM72Q6ZMU5 477 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM17Q86X19 198 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CPNE9Q8IYJ1 553 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 BLIDQ8IZY5 108 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PI4KAP1Q8N8J0 262 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 LRTOMTQ8WZ04 291 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ELMO3Q96BJ8 720 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PIGSQ96S52 555 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 HOPXQ9BPY8 73 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CHRDQ9H2X0 955 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SEMA6BQ9H3T3 888 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 KANSL2Q9H9L4 492 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 THUMPD1Q9NXG2 353 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 AGO1Q9UL18 857 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SAMHD1Q9Y3Z3 626 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 MFHAS1Q9Y4C4 1052 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TCRBV3S1A0A5B6 114 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF879B4DU55 563 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TULP3O75386 442 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 WBP4O75554 376 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RAD17O75943 681 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TNNI1P19237 187 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 IL6STP40189 918 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CHRNDQ07001 517 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PRKAA1Q13131 559 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PRKG2Q13237 762 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CLN3Q13286 438 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 LLGL1Q15334 1064 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ZIK1Q3SY52 487 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 PDSS1Q5T2R2 415 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 GPR158Q5T848 1215 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 LRRC8EQ6NSJ5 796 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms