RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CCNA2P20248 432 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CD86P42081 329 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 TRAF2Q12933 501 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CFAP52Q8N1V2 620 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CENPNQ96H22 339 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-201ENST00000338910 FEM1CQ96JP0 617 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 VN1R3Q9BXE9 311 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 UNKQ9C0B0 810 aaKnown RBP18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CWH43Q9H720 699 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 OAZ3Q9UMX2 235 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CPNE6O95741 557 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 FASP25445 335 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 OR1E1P30953 314 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 OR1D2P34982 312 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 RAB10P61026 200 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 POLD3Q15054 466 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-201ENST00000338910 NEDD8Q15843 81 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CYP2A13Q16696 494 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 MAP7D1Q3KQU3 841 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 NADSYN1Q6IA69 706 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 ZBTB46Q86UZ6 589 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 MFSD6LQ8IWD5 586 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CMTR2Q8IYT2 770 aaKnown RBP18.66■□□□□ 0.58
PSPC1-201ENST00000338910 OR13F1Q8NGS4 319 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 SLC25A51Q9H1U9 297 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 FNIP2Q9P278 1114 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 NEMP2A6NFY4 417 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 NME4O00746 187 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ARNTP27540 789 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 TMED10P49755 219 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 TMBIM6P55061 237 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 RPS3AP61247 264 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 DSC2Q02487 901 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 GNA12Q03113 381 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 BCL2A1Q16548 175 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ROPN1LQ96C74 230 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 MRPL57Q9BQC6 102 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 C1orf50Q9BV19 199 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 MTF2Q9Y483 593 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 TPST1O60507 370 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 RAMP2O60895 175 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 NOL3O60936 208 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 GPC4O75487 556 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 IGLV3-27P01718 113 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 MATN1P21941 496 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 IL10P22301 178 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ATP5F1P24539 256 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 CAPGP40121 348 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ARCN1P48444 511 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 HLCSP50747 726 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ATP6V0D1P61421 351 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 SMARCB1Q12824 385 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 IHHQ14623 411 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 INPP5AQ14642 412 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 EML3Q32P44 896 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 CYBRD1Q53TN4 286 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 CNKSR3Q6P9H4 555 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 KDELC1Q6UW63 502 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 RETREG3Q86VR2 466 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 SPPL2CQ8IUH8 684 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 IMP4Q96G21 291 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 IGSF21Q96ID5 467 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 YTHDF1Q9BYJ9 559 aaKnown RBP18.65■□□□□ 0.58
PSPC1-201ENST00000338910 C8orf4Q9NR00 106 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 ABCD2Q9UBJ2 740 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 LAMA3Q16787 3333 aa18.65■□□□□ 0.58
PSPC1-201ENST00000338910 GREB1Q4ZG55 1949 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 DRGXA6NNA5 263 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 ZNF24P17028 368 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 ACVRL1P37023 503 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 CD300CQ08708 224 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.58
PSPC1-201ENST00000338910 GALNT18Q6P9A2 607 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 CHST15Q7LFX5 561 aaPredicted RBP18.64■□□□□ 0.58
PSPC1-201ENST00000338910 FUNDC1Q8IVP5 155 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 GOLM1Q8NBJ4 401 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 PPP1R2P1Q96PQ5 205 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 HEPHQ9BQS7 1158 aa18.64■□□□□ 0.58
PSPC1-201ENST00000338910 MRM3Q9HC36 420 aaKnown RBP18.64■□□□□ 0.58
PSPC1-201ENST00000338910 EI24O14681 340 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 EFEMP2O95967 443 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 ZDHHC11BP0C7U3 371 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 STMN1P16949 149 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 PSMA4P25789 261 aaKnown RBP18.64■□□□□ 0.57
PSPC1-201ENST00000338910 POLR2IP36954 125 aaKnown RBP18.64■□□□□ 0.57
PSPC1-201ENST00000338910 TMTC4Q5T4D3 741 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 C1orf53Q5VUE5 145 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 SLC8B1Q6J4K2 584 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 LCN8Q6JVE9 175 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 KIAA1841Q6NSI8 718 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 USP51Q70EK9 711 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 ADGRG5Q8IZF4 528 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 DHRSXQ8N5I4 330 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 MYRFLQ96LU7 910 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 TRIM15Q9C019 465 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 NACA2Q9H009 215 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 BPTFQ12830 3046 aa18.64■□□□□ 0.57
PSPC1-201ENST00000338910 FAM95CA0A1B0GW59 222 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 GJB3O75712 270 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms