RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UMPSP11172 480 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 RPS3AP61247 264 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF252P-AS1Q0IIN9 211 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 PKN3Q6P5Z2 889 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ANKRD46Q86W74 232 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 OR52E6Q96RD3 313 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TINF2Q9BSI4 451 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CENPOQ9BU64 300 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CNPPD1Q9BV87 410 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 NKIRAS2Q9NYR9 191 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 AP2A2O94973 939 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CD86P42081 329 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 MAPK12P53778 367 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SPDYE7PQ495Y7 208 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SNAP47Q5SQN1 464 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TUBA3EQ6PEY2 450 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 NIPA1Q7RTP0 329 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 KRT74Q7RTS7 529 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ST6GALNAC4Q9H4F1 302 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ACTR3BQ9P1U1 418 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ISPDA4D126 451 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CLDN5O00501 218 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SDHDO14521 159 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 GUCY1B2O75343 617 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 MZF1P28698 734 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 PLA2G16P53816 162 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SNRPD2P62316 118 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SCN1BQ07699 218 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 RBM48Q5RL73 367 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 FAM91A1Q658Y4 838 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 GPRIN3Q6ZVF9 776 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 EIF3MQ7L2H7 374 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 MMAAQ8IVH4 418 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 C7orf57Q8NEG2 295 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 WDR36Q8NI36 951 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 IRGQQ8WZA9 623 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SORT1Q99523 831 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 LPIN3Q9BQK8 851 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TIGARQ9NQ88 270 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TMPRSS4Q9NRS4 437 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 DYRK3O43781 588 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 TXNL4AP83876 142 aaKnown RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 VGLL4Q14135 290 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 PSMD5Q16401 504 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF549Q6P9A3 640 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 SNX10Q9Y5X0 201 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 SLC22A2O15244 555 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 EGFRP00533 1210 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 F9P00740 461 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 IL6P05231 212 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 RAP2AP10114 183 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 MBL2P11226 248 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 POU2F1P14859 743 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 RRM2P31350 389 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CHRNA4P43681 627 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 DGKQP52824 942 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ALDH6A1Q02252 535 aaKnown RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 TIGD6Q17RP2 521 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 GNASQ5JWF2 1037 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 TIFABQ6ZNK6 161 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF597Q96LX8 424 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 TSSK3Q96PN8 268 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 KLHL1Q9NR64 748 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ELOVL7A1L3X0 281 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 TMEM221A6NGB7 291 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ADAM23O75077 832 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CD247P20963 164 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 NOS2P35228 1153 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 HTR2BP41595 481 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 POLD2P49005 469 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ENPEPQ07075 957 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 PHKG1Q16816 387 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms