RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ADAMDEC1O15204 470 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 FOSL1P15407 271 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 MPPE1Q53F39 396 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 RNASEH2BQ5TBB1 312 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 CNSTQ6PJW8 725 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SAMD14Q8IZD0 417 aaPredicted RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 ACOT12Q8WYK0 555 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 P2RY11Q96G91 374 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 BPIFA1Q9NP55 256 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SEC14L3Q9UDX4 400 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SLC22A2O15244 555 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 KERAO60938 352 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SIN3BO75182 1162 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TM7SF2O76062 418 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 IGFBP5P24593 272 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 RAB15P59190 212 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 CACNG1Q06432 222 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TEX44Q53QW1 395 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SLC30A8Q8IWU4 369 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ZNF563Q8TA94 476 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 STYXQ8WUJ0 223 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 C1GALT1C1Q96EU7 318 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 AARSD1Q9BTE6 412 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 MAFFQ9ULX9 164 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TNS2Q63HR2 1409 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TRMUO75648 421 aaKnown RBP13□□□□□ -0.33
HLCS-201ENST00000336648 IL1BP01584 269 aa13□□□□□ -0.33
HLCS-201ENST00000336648 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
HLCS-201ENST00000336648 PTP4A2Q12974 167 aa13□□□□□ -0.33
HLCS-201ENST00000336648 GLYATQ6IB77 296 aa13□□□□□ -0.33
HLCS-201ENST00000336648 PHYKPLQ8IUZ5 450 aa13□□□□□ -0.33
HLCS-201ENST00000336648 FAM47BQ8NA70 645 aa13□□□□□ -0.33
HLCS-201ENST00000336648 C12orf66Q96MD2 445 aa13□□□□□ -0.33
HLCS-201ENST00000336648 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TM6SF2Q9BZW4 377 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TMPRSS4Q9NRS4 437 aa13□□□□□ -0.33
HLCS-201ENST00000336648 BCKDKO14874 412 aa13□□□□□ -0.33
HLCS-201ENST00000336648 UROSP10746 265 aa13□□□□□ -0.33
HLCS-201ENST00000336648 CTBP1Q13363 440 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ACAP2Q15057 778 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TMEM192Q8IY95 271 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TRPV5Q9NQA5 729 aa13□□□□□ -0.33
HLCS-201ENST00000336648 CCDC177Q9NQR7 707 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 MIOSQ9NXC5 875 aa13□□□□□ -0.33
HLCS-201ENST00000336648 RIIAD1A6NNX1 92 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TLR5O60602 858 aa13□□□□□ -0.33
HLCS-201ENST00000336648 HNRNPLP14866 589 aaKnown RBP eCLIP13□□□□□ -0.336e-10■■■■□ 23.6
HLCS-201ENST00000336648 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
HLCS-201ENST00000336648 HECTD2Q5U5R9 776 aa13□□□□□ -0.33
HLCS-201ENST00000336648 FATE1Q969F0 183 aa13□□□□□ -0.33
HLCS-201ENST00000336648 SLC38A4Q969I6 547 aa13□□□□□ -0.33
HLCS-201ENST00000336648 C11orf24Q96F05 449 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 FCRL2Q96LA5 508 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 CORO1BQ9BR76 489 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TMEM109Q9BVC6 243 aa13□□□□□ -0.33
HLCS-201ENST00000336648 MED11Q9P086 117 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
HLCS-201ENST00000336648 TMEM150BA6NC51 233 aa13□□□□□ -0.33
HLCS-201ENST00000336648 DNTTP04053 509 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ETS2P15036 469 aa13□□□□□ -0.33
HLCS-201ENST00000336648 DEFA5Q01523 94 aa13□□□□□ -0.33
HLCS-201ENST00000336648 AADACL2Q6P093 401 aa13□□□□□ -0.33
HLCS-201ENST00000336648 GPR135Q8IZ08 494 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ZBTB2Q8N680 514 aa13□□□□□ -0.33
HLCS-201ENST00000336648 HAS1Q92839 578 aa13□□□□□ -0.33
HLCS-201ENST00000336648 LGMNQ99538 433 aa13□□□□□ -0.33
HLCS-201ENST00000336648 SMPD3Q9NY59 655 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 IFNW1P05000 195 aa13□□□□□ -0.33
HLCS-201ENST00000336648 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 PTPN9P43378 593 aa13□□□□□ -0.33
HLCS-201ENST00000336648 CDKL1Q00532 357 aa13□□□□□ -0.33
HLCS-201ENST00000336648 SCN1BQ07699 218 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ZCCHC12Q6PEW1 402 aa13□□□□□ -0.33
HLCS-201ENST00000336648 RAB11FIP2Q7L804 512 aa13□□□□□ -0.33
HLCS-201ENST00000336648 SLC26A9Q7LBE3 791 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ALYREFQ86V81 257 aaKnown RBP13□□□□□ -0.33
HLCS-201ENST00000336648 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
HLCS-201ENST00000336648 NOL11Q9H8H0 719 aaKnown RBP13□□□□□ -0.33
HLCS-201ENST00000336648 ZDHHC4Q9NPG8 344 aa13□□□□□ -0.33
HLCS-201ENST00000336648 RAB23Q9ULC3 237 aa13□□□□□ -0.33
HLCS-201ENST00000336648 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
HLCS-201ENST00000336648 GLYATL1P3A0A0U1RQE8 302 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 H0Y858 1186 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 GSC2O15499 205 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 B4GALT4O60513 344 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 RSL1D1O76021 490 aaKnown RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 NDST3O95803 873 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 PRPS2P11908 318 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 LACTB2Q53H82 288 aaPredicted RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 RNASE12Q5GAN4 147 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms