RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 NKIRAS2Q9NYR9 191 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 OGFRQ9NZT2 677 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 AKT3Q9Y243 479 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 CACNA1HO95180 2353 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 SCN1AP35498 2009 aa1.53□□□□□ -2.17
LINC00643-201ENST00000334389 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 VWA3AA6NCI4 1184 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3BA6NDS4 549 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TTC36A6NLP5 189 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 B4DSR2 109 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RASA4BC9J798 803 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PRSS44E7EML9 344 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF185O15231 689 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RASA4O43374 803 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CDKL5O76039 1030 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FGAP02671 866 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 GBAP04062 536 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CFIP05156 583 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RNF224P0DH78 156 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NAGAP17050 411 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RXRAP19793 462 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PTH2RP49190 550 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RGS7P49802 495 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 AGTR2P50052 363 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 HK3P52790 923 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 AK2P54819 239 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ANAPC15P60006 121 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CDK17Q00537 523 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 IL10RAQ13651 578 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 KCNB1Q14721 858 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NCF4Q15080 339 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF805Q5CZA5 627 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 C3orf38Q5JPI3 329 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TTC22Q5TAA0 569 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NSUN5P2Q63ZY6 315 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 WWC2Q6AWC2 1192 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CRELD2Q6UXH1 353 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF793Q6ZN11 406 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 KCTD1Q719H9 257 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 LYPD6Q86Y78 171 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 C17orf78Q8N4C9 275 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PLD5Q8N7P1 536 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ENDOVQ8N8Q3 282 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 C1orf131Q8NDD1 294 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CTCFLQ8NI51 663 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 BRSK1Q8TDC3 778 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SETD7Q8WTS6 366 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 JPH3Q8WXH2 748 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM44Q96DX7 344 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ART5Q96L15 291 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SLC6A18Q96N87 628 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CAMK1GQ96NX5 476 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SERPINB11Q96P15 392 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CSPG4P5Q96PW8 444 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TWNKQ96RR1 684 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 MEIS3Q99687 375 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 WACQ9BTA9 647 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TUBB6Q9BUF5 446 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CDCA4Q9BXL8 241 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 UBA5Q9GZZ9 404 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 BCL11AQ9H165 835 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CARD9Q9H257 536 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NEUROG2Q9H2A3 272 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CRISPLD1Q9H336 500 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ATXN3LQ9H3M9 355 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PGPEP1Q9NXJ5 209 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RCOR3Q9P2K3 495 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ACSL5Q9ULC5 683 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZFR2Q9UPR6 939 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FARSAQ9Y285 508 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SPO11Q9Y5K1 396 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TIMM13Q9Y5L4 95 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 A0A0C4DFX4 3053 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DNAH10Q8IVF4 4471 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TRAV20A0A0B4J274 112 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 A0A1W2PRU2 124 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FAM170AA1A519 330 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PRRT4C9JH25 899 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SNAP23O00161 211 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SMAD9O15198 467 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ANP32CO43423 234 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TCF21O43680 179 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DEXIO95424 95 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SLC16A8O95907 504 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ACTL6AO96019 429 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 HPNP05981 417 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DLATP10515 647 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CCNB1P14635 433 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 COL8A1P27658 744 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FLT3P36888 993 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 MMP12P39900 470 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 GP5P40197 560 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 VIPR2P41587 438 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 LIG3P49916 1009 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CCL7P80098 99 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 APBA1Q02410 837 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ARID5AQ03989 594 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SOX4Q06945 474 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DHX9Q08211 1270 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms