RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LCP2Q13094 533 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 C16orf72Q14CZ0 275 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 SLC2A7Q6PXP3 512 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 TMEM26Q6ZUK4 368 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 LYSMD3Q7Z3D4 306 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 GPR180Q86V85 440 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 CDKN2AIPNLQ96HQ2 116 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 FEM1CQ96JP0 617 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 SUSD3Q96L08 255 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
VPS33B-201ENST00000333371 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 BTN3A1O00481 513 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 MATN4O95460 622 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 PAX3P23760 479 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SLC26A3P40879 764 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 CAP1Q01518 475 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SERINC3Q13530 473 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SELPLGQ14242 412 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 ZNF235Q14590 738 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 C18orf21Q32NC0 220 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 CYBRD1Q53TN4 286 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 TMEM214Q6NUQ4 689 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 GALNT7Q86SF2 657 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 MON1AQ86VX9 555 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 OR4K2Q8NGD2 314 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 TADA1Q96BN2 335 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 CXorf21Q9HAI6 301 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 GID8Q9NWU2 228 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 FAF1Q9UNN5 650 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 A0A1W2PP18 115 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SLC12A8A0AV02 714 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 AOC2O75106 756 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 RASAL1O95294 804 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 HRH2P25021 359 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 RFC2P35250 354 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 POLR2IP36954 125 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 ARL1P40616 181 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 KCNK10P57789 538 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 RAB39AQ14964 217 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 RBBP7Q16576 425 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 TRIM71Q2Q1W2 868 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 KCTD21Q4G0X4 260 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 FGD3Q5JSP0 725 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 C10orf120Q5SQS8 335 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 CDYL2Q8N8U2 506 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SIDT2Q8NBJ9 832 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 OR52B6Q8NGF0 335 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SGCDQ92629 289 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 FUBP1Q96AE4 644 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 RNF145Q96MT1 663 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 C9orf16Q9BUW7 83 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 POLR1EQ9GZS1 481 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 BPIFA1Q9NP55 256 aa12.22□□□□□ -0.45
VPS33B-201ENST00000333371 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 EIF2B4Q9UI10 523 aaKnown RBP12.22□□□□□ -0.45
VPS33B-201ENST00000333371 IQCF5A8MTL0 148 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 KERAO60938 352 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 OR4F21O95013 312 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 CKBP12277 381 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 IDO1P14902 403 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 ELK4P28324 431 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 SUOXP51687 545 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 HK3P52790 923 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 ESRRGP62508 458 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 NRG1Q02297 640 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-201ENST00000333371 ACVR1Q04771 509 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 BNIP2Q12982 314 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 NADSYN1Q6IA69 706 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 XKR5Q6UX68 686 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 SPRED1Q7Z699 444 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 PIANPQ8IYJ0 282 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 NAT16Q8N8M0 369 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 RAET1EQ8TD07 263 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 KIAA1191Q96A73 305 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 PPM1MQ96MI6 270 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 TFB2MQ9H5Q4 396 aaKnown RBP12.21□□□□□ -0.45
VPS33B-201ENST00000333371 SCML2Q9UQR0 700 aa12.21□□□□□ -0.45
VPS33B-201ENST00000333371 CCDC154A6NI56 674 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 H3BMQ9 156 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 GIPC1O14908 333 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 HOXD10P28358 340 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 KCNQ1P51787 676 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 MTPNP58546 118 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 NOGQ13253 232 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 RCAN2Q14206 197 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 PTPRNQ16849 979 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 PSAPL1Q6NUJ1 521 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms