RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 NCF1CA8MVU1 366 aaPredicted RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 GOT2P00505 430 aaKnown RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 HOXD8P13378 290 aaPredicted RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 NCF1P14598 390 aaPredicted RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 TUBA3CQ13748 450 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 DAG1Q14118 895 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 IMPG1Q17R60 797 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 MARC1Q5VT66 337 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 SPATA19Q7Z5L4 167 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 THAP5Q7Z6K1 395 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 PROSER1Q86XN7 944 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 CYP2S1Q96SQ9 504 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 DGCR6LQ9BY27 220 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 LTB4R2Q9NPC1 389 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 RNF112Q9ULX5 631 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 TREHO43280 583 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 LDB2O43679 373 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 DEAF1O75398 565 aaPredicted RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 CRHBPP24387 322 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 HTR1EP28566 365 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 PCSK1P29120 753 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 KCNC4Q03721 635 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 YWHAHQ04917 246 aaPredicted RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 CD300CQ08708 224 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 EIF4EBP2Q13542 120 aaPredicted RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 TAF2Q6P1X5 1199 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 RHEBL1Q8TAI7 183 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 GAD1Q99259 594 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 NOL6Q9H6R4 1146 aaKnown RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 TYW5A2RUC4 315 aaKnown RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 CD3EAPO15446 510 aaKnown RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 ALPLP05186 524 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 MMP2P08253 660 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 TPD52P55327 224 aaPredicted RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 OXCT1P55809 520 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 PIGFQ07326 219 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 SEMA3AQ14563 771 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 PAN2Q504Q3 1202 aaKnown RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 ARTNQ5T4W7 220 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 AFMIDQ63HM1 303 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 GTF2IRD2BQ6EKJ0 949 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 SLC2A7Q6PXP3 512 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 BTLAQ7Z6A9 289 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 GTF2IRD2Q86UP8 949 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 BLOC1S5Q8TDH9 187 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 ACOX2Q99424 681 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 PAAF1Q9BRP4 392 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 LRRC3Q9BY71 257 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 AGO3Q9H9G7 860 aaKnown RBP23.43■■□□□ 1.34
TSKU-201ENST00000333090 TRIM17Q9Y577 477 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 HS3ST4Q9Y661 456 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 ARL5AQ9Y689 179 aa23.43■■□□□ 1.34
TSKU-201ENST00000333090 MBLAC1A4D2B0 266 aaPredicted RBP23.42■■□□□ 1.34
TSKU-201ENST00000333090 CASTOR2A6NHX0 329 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 UPK1AO00322 258 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 SNX2O60749 519 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 CDH1P12830 882 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 IDUAP35475 653 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 OPRL1P41146 370 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 ANKS6Q68DC2 871 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 RIMKLAQ8IXN7 391 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 C8orf59Q8N0T1 100 aaPredicted RBP23.42■■□□□ 1.34
TSKU-201ENST00000333090 SPARTQ8N0X7 666 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 ABHD11Q8NFV4 315 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 HMCESQ96FZ2 354 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 OSER1Q9NX31 292 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 FAM50BQ9Y247 325 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 CNTN5O94779 1100 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 JAK1P23458 1154 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 SPCS2Q15005 226 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 SLC22A17Q8WUG5 538 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 TAMM41Q96BW9 452 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 ERLEC1Q96DZ1 483 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 PPM1MQ96MI6 270 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 TOR3AQ9H497 397 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 TFB2MQ9H5Q4 396 aaKnown RBP23.42■■□□□ 1.34
TSKU-201ENST00000333090 HPS4Q9NQG7 708 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 DAPK2Q9UIK4 370 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 B3GNT3Q9Y2A9 372 aa23.42■■□□□ 1.34
TSKU-201ENST00000333090 ENO2P09104 434 aaPredicted RBP23.41■■□□□ 1.34
TSKU-201ENST00000333090 HAPLN1P10915 354 aaPredicted RBP23.41■■□□□ 1.34
TSKU-201ENST00000333090 IL12AP29459 219 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 MTPNP58546 118 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 EMX2Q04743 252 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 DTWD1Q8N5C7 304 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 DCBLD1Q8N8Z6 715 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 TMLHEQ9NVH6 421 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 UBA6A0AVT1 1052 aaPredicted RBP23.41■■□□□ 1.34
TSKU-201ENST00000333090 PIRTP0C851 137 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 PRR35P0CG20 571 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 GSTM2P28161 218 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 AQP6Q13520 282 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 MRNIPQ6NTE8 343 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 CRTC3Q6UUV7 619 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 ITFG1Q8TB96 612 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 STAG3L4Q8TBR4 150 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 MAGED4Q96JG8 741 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 RTP3Q9BQQ7 232 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 FUNDC2Q9BWH2 189 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 EVLQ9UI08 416 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms