RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 GLYATL1P3A0A0U1RQE8 302 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 FAM172BPA6NC97 362 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 A8MUI8 341 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 PLIN3O60664 434 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 IL33O95760 270 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 MMP3P08254 477 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 AVPR1BP47901 424 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 APOBEC3HQ6NTF7 200 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 C11orf24Q96F05 449 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 C8orf48Q96LL4 319 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CDT1Q9H211 546 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 XPR1Q9UBH6 696 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 IRAK3Q9Y616 596 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 FOXO6A8MYZ6 492 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CHADO15335 359 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CDK14O94921 469 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ITGA2P17301 1181 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ZFP1Q6P2D0 407 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 RASGEF1AQ8N9B8 481 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ZHX1-C8orf76Q96EF9 292 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 FUT8Q9BYC5 575 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 B3GNT4Q9C0J1 378 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 RAI2Q9Y5P3 530 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 MSCO60682 206 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ZNF16P17020 682 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 PAX7P23759 505 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 PRKAA2P54646 552 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 TEAD4Q15561 434 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 LIPMQ5VYY2 423 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 FOXRED2Q8IWF2 684 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 METTL27Q8N6F8 245 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 TSEN2Q8NCE0 465 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 COPS8Q99627 209 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 GORASP1Q9BQQ3 440 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 F7P08709 466 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 GJA1P17302 382 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 TKTP29401 623 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 CRYBB1P53674 252 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 DRG2P55039 364 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 EVX2Q03828 476 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 GRSF1Q12849 480 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLN8-201ENST00000331222 OR6K6Q8NGW6 343 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ASB2Q96Q27 587 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 NOL11Q9H8H0 719 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 CORO2BQ9UQ03 480 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 SLC26A3P40879 764 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 RAB2AP61019 212 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 HECTD2Q5U5R9 776 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CRYBG2Q8N1P7 616 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 RNF157Q96PX1 679 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 TBC1D30Q9Y2I9 924 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 PIK3C2BO00750 1634 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 CCDC162PA2VCL2 907 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 PRKAR1AP10644 381 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 SEPHS1P49903 392 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ZNF143P52747 638 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 MPP1Q00013 466 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CAPSQ13938 189 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 KLHL35Q6PF15 583 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ENPP7Q6UWV6 458 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 ZBTB8BQ8NAP8 495 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 LCN9Q8WX39 176 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 SCLYQ96I15 445 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 MRPL57Q9BQC6 102 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 PHPT1Q9NRX4 125 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 PDP1Q9P0J1 537 aaPredicted RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 MRPS33Q9Y291 106 aaKnown RBP10.5□□□□□ -0.73
CLN8-201ENST00000331222 PCDHGC4Q9Y5F7 938 aa10.5□□□□□ -0.73
CLN8-201ENST00000331222 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 RGSL1A5PLK6 1076 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 LIASO43766 372 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PRH1P02810 166 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MPSTP25325 297 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CMPK1P30085 196 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PTPN9P43378 593 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CLCN5P51795 746 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PSME3P61289 254 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MLIPQ5VWP3 458 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ABRAXAS1Q6UWZ7 409 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 HFE2Q6ZVN8 426 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PIK3C3Q8NEB9 887 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ANKRD7Q92527 254 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 HIST1H2AAQ96QV6 131 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 LPIN3Q9BQK8 851 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PCDHGC5Q9Y5F6 944 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 E9PAM4 449 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 hCG_2039718K7EN88 272 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MAPK12P53778 367 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SEC23AQ15436 765 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 DACT2Q5SW24 774 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ZPBP2Q6X784 338 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms