RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ALDH3A1P30838 453 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 MC4RP32245 332 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 ADPRHP54922 357 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 CORO7P57737 925 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 ACOX1Q15067 660 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 CNSTQ6PJW8 725 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 AFTPHQ6ULP2 937 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 CCDC91Q7Z6B0 441 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 GBP7Q8N8V2 638 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 OR4L1Q8NH43 312 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 RDH11Q8TC12 318 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 CXorf40AQ8TE69 158 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 C10orf82Q8WW14 230 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 TSPAN17Q96FV3 270 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 COQ10AQ96MF6 247 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 TRIM55Q9BYV6 548 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 NMRAL1Q9HBL8 299 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 PKD2L2Q9NZM6 624 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 NCKAP1Q9Y2A7 1128 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 MUC3AQ02505 3323 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 H7C0S8 307 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 PSMD11O00231 422 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 CD3EAPO15446 510 aaKnown RBP18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 GPR39O43194 453 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 TSPAN6O43657 245 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 PCDH8O95206 1070 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 CPA3P15088 417 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 GRK2P25098 689 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SPAM1P38567 509 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SLC12A2P55011 1212 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 IRX4P78413 519 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 IRF9Q00978 393 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 OCRLQ01968 901 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 STX3Q13277 289 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 TECPR1Q7Z6L1 1165 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 KBTBD6Q86V97 674 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 GPATCH11Q8N954 259 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 C19orf43Q9BQ61 176 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 ITM2CQ9NQX7 267 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 THAP1Q9NVV9 213 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 ZNF358Q9NW07 568 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 USP36Q9P275 1121 aaKnown RBP18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 PRR23AA6NEV1 266 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 TMEM221A6NGB7 291 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 M0R296 226 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 FGF3P11487 239 aaPredicted RBP18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 TAS2R39P59534 338 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SEMA3AQ14563 771 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 TSNAXIP1Q2TAA8 658 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SEL1L3Q68CR1 1132 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SDCCAG8Q86SQ7 713 aaPredicted RBP18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 CEP97Q8IW35 865 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 SCAMP4Q969E2 229 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 FAM96AQ9H5X1 160 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 CATSPERZQ9NTU4 200 aa18.6■□□□□ 0.57
EXOSC3-201ENST00000327304 GLYATL1P3A0A0U1RQE8 302 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 IGLON5A6NGN9 336 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PHGDHO43175 533 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 RECQL5O94762 991 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PRAMEF1O95521 474 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 APBB3O95704 486 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 AOC1P19801 751 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 SAT1P21673 171 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PXNP49023 591 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 CDKN1CP49918 316 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 SFSWAPQ12872 951 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 CHRNA6Q15825 494 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 TYSND1Q2T9J0 566 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 ZNF789Q5FWF6 425 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 LDB1Q86U70 411 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PPP1R14CQ8TAE6 165 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 SREK1Q8WXA9 508 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 DTD2Q96FN9 168 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PLEKHG4BQ96PX9 1271 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 TPSD1Q9BZJ3 242 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 ACTR5Q9H9F9 607 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 NPHS2Q9NP85 383 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 INTS10Q9NVR2 710 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PRDM4Q9UKN5 801 aa18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 ZFR2Q9UPR6 939 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-201ENST00000327304 PLXNA2O75051 1894 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 WNT9AO14904 365 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 LZTS3O60299 673 aaPredicted RBP18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 SRP72O76094 671 aaKnown RBP18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 KLHL2O95198 593 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 SERPINE1P05121 402 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 ACSL1P33121 698 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 CA5AP35218 305 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 GMPRP36959 345 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 KPNA2P52292 529 aaKnown RBP18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 ZRANB3Q5FWF4 1079 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 FAM45BPQ6NSW5 357 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 PSAPL1Q6NUJ1 521 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 C10orf107Q8IVU9 208 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 PIANPQ8IYJ0 282 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 CENPLQ8N0S6 344 aaPredicted RBP18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 FAM45AQ8TCE6 357 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 RMDN2Q96LZ7 410 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 TCF12Q99081 682 aa18.58■□□□□ 0.57
EXOSC3-201ENST00000327304 ABCG8Q9H221 673 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms