RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 OTUD3Q5T2D3 398 aaPredicted RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TMEM25Q86YD3 366 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 FEM1CQ96JP0 617 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 BBS2Q9BXC9 721 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 PRDM16Q9HAZ2 1276 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 ZNF212Q9UDV6 495 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 LRRC42Q9Y546 428 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 WNT6Q9Y6F9 365 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 HIDE1A8MVS5 230 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 IMPDH1P20839 514 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 HERVK_113P63132 956 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 PLOD1Q02809 727 aaPredicted RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 NFYCQ13952 458 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 CHRNA6Q15825 494 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 DDX53Q86TM3 631 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TRIM74Q86UV6 250 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 RETREG3Q86VR2 466 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 RP9Q8TA86 221 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 STAG3L4Q8TBR4 150 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 ULK4Q96C45 1275 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 NMD3Q96D46 503 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 ERVK-6Q9BXR3 956 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TUBB1Q9H4B7 451 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 ZFYVE1Q9HBF4 777 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 WWOXQ9NZC7 414 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MBD1Q9UIS9 605 aaPredicted RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TGM5O43548 720 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 RNASEH2AO75792 299 aaKnown RBP10.56□□□□□ -0.72
CUL4A-201ENST00000326335 STAMBPO95630 424 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MTHFD2P13995 350 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 SLC2A4P14672 509 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 ITPKAP23677 461 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MTTPP55157 894 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MTPNP58546 118 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 FOLH1Q04609 750 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TBCCQ15814 346 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 SYVN1Q86TM6 617 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 LILRA2Q8N149 483 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MYO19Q96H55 970 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 CNDP1Q96KN2 507 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 MTRRQ9UBK8 725 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 POLG2Q9UHN1 485 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 TSC2P49815 1807 aa10.56□□□□□ -0.72
CUL4A-201ENST00000326335 DRGXA6NNA5 263 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CACNG3O60359 315 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 NRP2O60462 931 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CAPN3P20807 821 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 HMOX2P30519 316 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 TIAL1Q01085 375 aaKnown RBP eCLIP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 LMAN2Q12907 356 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 BLMHQ13867 455 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 PTGR1Q14914 329 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 NAIF1Q69YI7 327 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CANT1Q8WVQ1 401 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 UBXN10Q96LJ8 280 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 VCXQ9H320 206 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 MMADHCQ9H3L0 296 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CACNA2D2Q9NY47 1150 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 RNF103-CHMP3A0A140T963 221 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 KDELR3O43731 214 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 PYGLP06737 847 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 LINGO3P0C6S8 592 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 MYOGP15173 224 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CCNHP51946 323 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 HK3P52790 923 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 RPL38P63173 70 aaKnown RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 PHKG1Q16816 387 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 ZIK1Q3SY52 487 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CNTN4Q8IWV2 1026 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 DCUN1D1Q96GG9 259 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CXXC1Q9P0U4 656 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 VTI1BQ9UEU0 232 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 F8W8V4 182 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 H3BNC9 293 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 LYNP07948 512 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 HNF1BP35680 557 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 AFTPHQ6ULP2 937 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 SLC39A5Q6ZMH5 540 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CLYBLQ8N0X4 340 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 PQLC1Q8N2U9 271 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 KLHL23Q8NBE8 558 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 FUBP1Q96AE4 644 aaKnown RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 AURKBQ96GD4 344 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 WRAP53Q9BUR4 548 aaKnown RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 CAAP1Q9H8G2 361 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 EPS15L1Q9UBC2 864 aa10.55□□□□□ -0.72
CUL4A-201ENST00000326335 LSM7Q9UK45 103 aaKnown RBP10.55□□□□□ -0.72
CUL4A-201ENST00000326335 ZNF711Q9Y462 761 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms