RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TAS2R40P59535 323 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 FBXO48Q5FWF7 155 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 EARS2Q5JPH6 523 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 FOXRED2Q8IWF2 684 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PIK3R3Q92569 461 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 DHRS1Q96LJ7 313 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 OXCT2Q9BYC2 517 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 ASAH2Q9NR71 780 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 IMP3Q9NV31 184 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 HIF3AQ9Y2N7 669 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ULK1O75385 1050 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 FAUP35544 74 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 CLCN2P51788 898 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CDH13P55290 713 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 RAB12Q6IQ22 244 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MREGQ8N565 214 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 DENND2DQ9H6A0 471 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 AP3M1Q9Y2T2 418 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 REXO2Q9Y3B8 237 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 RSL1D1O76021 490 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 CYP1A2P05177 515 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ITGA2BP08514 1039 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TFEBP19484 476 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 FOXN2P32314 431 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SEC13P55735 322 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 POLR2LP62875 67 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 FAM91A1Q658Y4 838 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SLC37A3Q8NCC5 494 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 LGMNQ99538 433 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TCF25Q9BQ70 676 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 POLE4Q9NR33 117 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 KBTBD4Q9NVX7 518 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ZNF780BQ9Y6R6 833 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 GVINP1Q7Z2Y8 2422 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ANKRD63C9JTQ0 380 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 NEDD8-MDP1E9PL57 170 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PCCBP05166 539 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PGAM2P15259 253 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PSMD8P48556 350 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SLC12A3P55017 1021 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TROAPQ12815 778 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PRKG2Q13237 762 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PARP6Q2NL67 630 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 STXBP5Q5T5C0 1151 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 AAGABQ6PD74 315 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ATCAYQ86WG3 371 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PANX1Q96RD7 426 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 EBNA1BP2Q99848 306 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 CST11Q9H112 138 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 OR6C70A6NIJ9 312 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 GOT1P17174 413 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ARFIP1P53367 373 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CDH4P55283 916 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ZNF155Q12901 538 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 CRY2Q49AN0 593 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TMEM214Q6NUQ4 689 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 DCBLD1Q8N8Z6 715 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ERMAPQ96PL5 475 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 ELOVL4Q9GZR5 314 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TMEM168Q9H0V1 697 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 OR51V1Q9H2C8 321 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ALG5Q9Y673 324 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TRAV6A0A075B6T7 132 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 C12orf71A8MTZ7 269 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 HDAC3O15379 428 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 AIREO43918 545 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MATN4O95460 622 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 CATP04040 527 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 DNTTP04053 509 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ALAS2P22557 587 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 BNC1Q01954 994 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 KLHDC10Q6PID8 442 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ART4Q93070 314 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ATP13A3Q9H7F0 1226 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 FBXL3Q9UKT7 428 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RNF17Q9BXT8 1623 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 EPHB6O15197 1021 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SAGP10523 405 aaPredicted RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 MAGEC3Q8TD91 643 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 PTCD2Q8WV60 388 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 COPS5Q92905 334 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 KANSL3Q9P2N6 904 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 PSME2Q9UL46 239 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 FKBP7Q9Y680 259 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 A2ML1A8K2U0 1454 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MATN2O00339 956 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MSI1O43347 362 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 CBX5P45973 191 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 XIAPP98170 497 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 PPP3CAQ08209 521 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RPA4Q13156 261 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ACAP2Q15057 778 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SNAPC1Q16533 368 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 PRSS58Q8IYP2 241 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RP9Q8TA86 221 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 C12orf43Q96C57 262 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 ITCHQ96J02 903 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 QRFPRQ96P65 431 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 AIF1LQ9BQI0 150 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms