RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 PFKFB4Q16877 469 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 MSANTD2Q6P1R3 559 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 IL1RL2Q9HB29 575 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 TUBA8Q9NY65 449 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 VWA8A3KMH1 1905 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 MIA3Q5JRA6 1907 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 IPO13O94829 963 aaKnown RBP15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 KCNH1O95259 989 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 GLP2RO95838 553 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 SELPP16109 830 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 LRP8Q14114 963 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 LDLRAP1Q5SW96 308 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 CUZD1Q86UP6 607 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 AUTS2Q8WXX7 1259 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 WBP2Q969T9 261 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 PTERQ96BW5 349 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 NSMCE3Q96MG7 304 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 C1orf232A0A0U1RR37 186 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 SLC38A8A6NNN8 435 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 SYN3O14994 580 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 CD3EAPO15446 510 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TPST1O60507 370 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GPC4O75487 556 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GALTP07902 379 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ARL1P40616 181 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 RAB15P59190 212 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GPNMBQ14956 572 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TECRLQ5HYJ1 363 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TMEM214Q6NUQ4 689 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GALNT18Q6P9A2 607 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 KCTD8Q6ZWB6 473 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 FBXO22Q8NEZ5 403 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 RDH11Q8TC12 318 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 CALML6Q8TD86 181 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 NSUN5Q96P11 429 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ADI1Q9BV57 179 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 CACNA2D2Q9NY47 1150 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ERGIC3Q9Y282 383 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 SPO11Q9Y5K1 396 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 KRBA1A5PL33 1030 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TRIM64A6NGJ6 449 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 UBXN8O00124 270 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 H2AFYO75367 372 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 SERPINF2P08697 491 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 MYF6P23409 242 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 FAM189BP81408 668 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 NFATC3Q12968 1075 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GPR17Q13304 367 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 MAP7D1Q3KQU3 841 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 OR4K2Q8NGD2 314 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 KCNA7Q96RP8 456 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 UNC93B1Q9H1C4 597 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 CD300AQ9UGN4 299 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 A0A087X1B8 175 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 A8MX80 341 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 BAIAP3O94812 1187 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ATP6V1B2P21281 511 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ATP5C1P36542 298 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 MERTKQ12866 999 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 PLD1Q13393 1074 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 AGKQ53H12 422 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 LHX8Q68G74 356 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ZNF549Q6P9A3 640 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 IGFN1Q86VF2 1251 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ANKFN1Q8N957 763 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ZBED2Q9BTP6 218 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 ATP13A1Q9HD20 1204 aa15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 HMX1Q9NP08 348 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 UTP6Q9NYH9 597 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 GPC6Q9Y625 555 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-201ENST00000319854 TRIM64BA6NI03 449 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 SDHDO14521 159 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 UBFD1O14562 309 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 SLC22A2O15244 555 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 B4GAT1O43505 415 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 SNAP91O60641 907 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 GFAPP14136 432 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 LEPRP48357 1165 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 HTRA3P83110 453 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 RGS21Q2M5E4 152 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 PIWIL4Q7Z3Z4 852 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 SNX29P2Q8IUI4 249 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 PTCD2Q8WV60 388 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 CYGBQ8WWM9 190 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 CINPQ9BW66 212 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 C2orf78A6NCI8 922 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 OR6C75A6NL08 312 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 CFAP99D6REC4 459 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 ARVCFO00192 962 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 KLKB1P03952 638 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 HTR7P34969 479 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 PSMD8P48556 350 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 ALDH7A1P49419 539 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 CLCN5P51795 746 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 YBX1P67809 324 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 ECT2LQ008S8 904 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms