RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
AFF3-201ENST00000317233 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
AFF3-201ENST00000317233 TAS2R7Q9NYW3 318 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 ZNF510Q9Y2H8 683 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 HOXB9P17482 250 aaPredicted RBP13.11□□□□□ -0.31
AFF3-201ENST00000317233 HOXC8P31273 242 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 RPIAP49247 311 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 DPEP2Q9H4A9 486 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 GPATCH2LQ9NWQ4 482 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 IDO1P14902 403 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 CD247P20963 164 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 ERVK-21P61565 698 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 BCL2A1Q16548 175 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 FBXO16Q8IX29 292 aaPredicted RBP13.11□□□□□ -0.31
AFF3-201ENST00000317233 TREX2Q9BQ50 279 aaPredicted RBP13.11□□□□□ -0.31
AFF3-201ENST00000317233 FN3KQ9H479 309 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
AFF3-201ENST00000317233 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 PGDP52209 483 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PTPN11Q06124 597 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 XAGE5Q8WWM1 108 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 TM6SF2Q9BZW4 377 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PCDHB16Q9NRJ7 776 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MAGED1Q9Y5V3 778 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 RTTNQ86VV8 2226 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 LOC100509620A0A075B734 347 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 KCNJ13O60928 360 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 ASGR1P07306 291 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 THEGLP0DJG4 465 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 CXCR3P49682 368 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MCL1Q07820 350 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 GRM3Q14832 879 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PLA2G4EQ3MJ16 856 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PITRM1Q5JRX3 1037 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 UBAP2Q5T6F2 1119 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 HM13Q8TCT9 377 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MARK4Q96L34 752 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
AFF3-201ENST00000317233 ESCO2Q56NI9 601 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 FAM129CQ86XR2 697 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 TCP10LQ8TDR4 215 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MPZL2O60487 215 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 UBOX5O94941 541 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 TMEM145Q8NBT3 493 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 CD300LFQ8TDQ1 290 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 UBXN10Q96LJ8 280 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 CORO7P57737 925 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SPDYCQ5MJ68 293 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 FBXO15Q8NCQ5 510 aaPredicted RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 TUBB1Q9H4B7 451 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 ADGRE2Q9UHX3 823 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
AFF3-201ENST00000317233 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SGPL1O95470 568 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 PSEN1P49768 467 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.1□□□□□ -0.31
AFF3-201ENST00000317233 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SLCO6A1Q86UG4 719 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 SOCS4Q8WXH5 440 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MFSD14AQ96MC6 490 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
AFF3-201ENST00000317233 MAST1Q9Y2H9 1570 aa13.09□□□□□ -0.31
AFF3-201ENST00000317233 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
AFF3-201ENST00000317233 PDPK1O15530 556 aa13.09□□□□□ -0.31
AFF3-201ENST00000317233 FGF19O95750 216 aa13.09□□□□□ -0.31
AFF3-201ENST00000317233 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
AFF3-201ENST00000317233 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
AFF3-201ENST00000317233 MSANTD2Q6P1R3 559 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms