RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MATN2O00339 956 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 KAT7O95251 611 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 TSPAN12O95859 305 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 HLA-EP13747 358 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 GRIA2P42262 883 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ELAVL3Q14576 367 aaKnown RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SERPINA13PQ6UXR4 307 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 MAVSQ7Z434 540 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 RAB44Q7Z6P3 723 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 TRMOQ9BU70 441 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 CLDND1Q9NY35 253 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SUN2Q9UH99 717 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ZDHHC2Q9UIJ5 367 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 RNF112Q9ULX5 631 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 PRSS21Q9Y6M0 314 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ATG2AQ2TAZ0 1938 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 FCHO1O14526 889 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 HDAC3O15379 428 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 TBX10O75333 385 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SLC25A14O95258 325 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SERPINA6P08185 405 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 MTHFD2P13995 350 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 MPSTP25325 297 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 CCR10P46092 362 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 DCDC1P59894 354 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ITPRIPL2Q3MIP1 535 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 ZNF678Q5SXM1 525 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 FAM91A1Q658Y4 838 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 NAIF1Q69YI7 327 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 EPGNQ6UW88 154 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 HSD11B1LQ7Z5J1 315 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 CPNE9Q8IYJ1 553 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 CLDN19Q8N6F1 224 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SUSD6Q92537 303 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 LINGO1Q96FE5 620 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SPATA16Q9BXB7 569 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 THAP10Q9P2Z0 257 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SARDHQ9UL12 918 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 CAPN7Q9Y6W3 813 aa16.56■□□□□ 0.24
CLCF1-201ENST00000312438 C2orf16Q68DN1 1984 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 BTN3A1O00481 513 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 NCALDP61601 193 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 HERVK_113P63132 956 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 RALGDSQ12967 914 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 KRT72Q14CN4 511 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
CLCF1-201ENST00000312438 CRY1Q16526 586 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 POM121L1PQ3SYA9 428 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 SEL1L3Q68CR1 1132 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 PARS2Q7L3T8 475 aaKnown RBP16.55■□□□□ 0.24
CLCF1-201ENST00000312438 SFTPA1Q8IWL2 248 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 RAVER1Q8IY67 606 aaKnown RBP16.55■□□□□ 0.24
CLCF1-201ENST00000312438 PIP4K2CQ8TBX8 421 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
CLCF1-201ENST00000312438 FAM129BQ96TA1 746 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 RPP25Q9BUL9 199 aaKnown RBP16.55■□□□□ 0.24
CLCF1-201ENST00000312438 ERVK-6Q9BXR3 956 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 LATS2Q9NRM7 1088 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 CD84Q9UIB8 345 aa16.55■□□□□ 0.24
CLCF1-201ENST00000312438 IGLV3-16A0A075B6K0 115 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 UBXN8O00124 270 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 CDC7O00311 574 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 SUPT7LO94864 414 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 TRIM16O95361 564 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 APODP05090 189 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 T-ENOLP0DO92 83 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 DGKAP23743 735 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 ITGB7P26010 798 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 MMP12P39900 470 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 RGS4P49798 205 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 RASSF2P50749 326 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 TUBB3Q13509 450 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 PFKFB4Q16877 469 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 LIPIQ6XZB0 460 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 FRMD7Q6ZUT3 714 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 Q6ZVL8 140 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 MTSS1LQ765P7 747 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 KIRREL3Q8IZU9 778 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
CLCF1-201ENST00000312438 AGR3Q8TD06 166 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
CLCF1-201ENST00000312438 PPP1R16AQ96I34 528 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 ASB2Q96Q27 587 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 PANX3Q96QZ0 392 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 SPATS2LQ9NUQ6 558 aaKnown RBP16.54■□□□□ 0.24
CLCF1-201ENST00000312438 SMOXQ9NWM0 555 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 KLHL42Q9P2K6 505 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 NFKBIL1Q9UBC1 381 aaPredicted RBP16.54■□□□□ 0.24
CLCF1-201ENST00000312438 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 TMCO1Q9UM00 188 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 PSMD11O00231 422 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 HNRNPCL1O60812 293 aaKnown RBP16.54■□□□□ 0.24
CLCF1-201ENST00000312438 DIAPH2O60879 1101 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 GFAPP14136 432 aa16.54■□□□□ 0.24
CLCF1-201ENST00000312438 HNRNPLP14866 589 aaKnown RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms